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Marker Overview
| Name | JPsnpHou00522 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A/G |
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| 5' Flanking Sequence | GAGAAATTTCATTGCCACAGATATCAGCATGTTGCTTGAAAATAAAGGATGGTAAAATGC
CCGTATCAATAATCCAGAAGTACCTTGCGATGAAACTTGAACTTAGCAGTGAAAATGAGG
TGGAGATACTGTGTCGGGGTCAGCCAGTGCTTCCAACATGGCATCTAGAAACCCTAGTTG
AGATGTGGTGCCGAACAGCACCAACAACGAAAAGGGTACCGGCAACAGTTGGCTCCTCGG
CTAAAGATTTTGTAATGGTCCTCAATTATTGTCGTAGGGTTCCAAATCCCTGAAAGAACC
AATAAAACTCTCGTTTTCTAG |
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| 3' Flanking Sequence | TAAAACAATGAAAGTTTCTCTTTTGTTGTTGATCGTAGGGTTCGAAATCTCTGAAAGAAC
AAATAAAATTTTCATCTCATGTTGTCTTCATCGTTTACCAGTTCAATATGTATAGTACCT
GTTGTCAGATTTTACTGGTATTTCAACTGAGTTTATCTGCTAGATCATATGTTTGTTCTA
TACAGGGTTATTATACAAAATGGTCCCTGAGATTTGCATCATCAATAGAAATGGTCCCTG
AGATTG |
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| Species | Pyrus pyrifolia |
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| Publication | [view all] |
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| Contact | Toshiya Yamamoto
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| Comment | SNP position in sequence: 322 |
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Publications
| Year | Publication |
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| 2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00522 ID=JPsnpHou00522; Name=JPsnpHou00522; organism=Pyrus pyrifolia; type=genetic_marker; length=568bp
GAGAAATTTCATTGCCACAGATATCAGCATGTTGCTTGAAAATAAAGGAT
GGTAAAATGCCCGTATCAATAATCCAGAAGTACCTTGCGATGAAACTTGA
ACTTAGCAGTGAAAATGAGGTGGAGATACTGTGTCGGGGTCAGCCAGTGC
TTCCAACATGGCATCTAGAAACCCTAGTTGAGATGTGGTGCCGAACAGCA
CCAACAACGAAAAGGGTACCGGCAACAGTTGGCTCCTCGGCTAAAGATTT
TGTAATGGTCCTCAATTATTGTCGTAGGGTTCCAAATCCCTGAAAGAACC
AATAAAACTCTCGTTTTCTAGrTAAAACAATGAAAGTTTCTCTTTTGTTG
TTGATCGTAGGGTTCGAAATCTCTGAAAGAACAAATAAAATTTTCATCTC
ATGTTGTCTTCATCGTTTACCAGTTCAATATGTATAGTACCTGTTGTCAG
ATTTTACTGGTATTTCAACTGAGTTTATCTGCTAGATCATATGTTTGTTC
TATACAGGGTTATTATACAAAATGGTCCCTGAGATTTGCATCATCAATAG
AAATGGTCCCTGAGATTG
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