|
Marker Overview
Name | JPsnpHou00613 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/C |
5' Flanking Sequence | GGAGTAGTCTTTGAGATCATCATCACCTTTGCTTTGGTTTACACTGTCTATGCAACAGCA
GCTGACCCCAAGAAGGGCTCGTTGGGCACCATTGCTCCCATCGCCATCGGTTTCATTGTC
GGGGCTAACATCTTGGCTGCCGGACCATTCTCCGGTGGGTCAATGAACCCGGCCCGGTCT
TTCGGTCCTGCCGTTGCTAGCGGCGACTTCCACGACAACTGGATCTACTGGGTTGGACCC
CTCATTGGTGGTGGACTTGCTGGCCTTATCTATGGAAACGTATTTATACACTCAGAACAT
GCACCCTTAGT |
3' Flanking Sequence | AGCGAGTACTGATAACTTGGTTGAGATTTAATTTGTTGCAAATGTGTTCCAGTGTATCAT
TTGTAATAAAAGGAGGAAGnGCAATTTTCTTTTGTTCTTTACTTCTTTTTGTCTTCAAGT
TTTCAGTTATTTATTCTCACTTTCCCAGCTTGGAACCTCCATTTTCTTGTGCTGTTTGTA
AAGCCCTTTTTGTAGGTCACTTTTTCCTTGTGAATAATGAATGAAGTCGGTGATTTCCAA
nAATGGCAAAAAAAAAAAANAAAAACTAGAGACTCGACCGAACGGACACAACG |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
|
Comment | SNP position in sequence: 312 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00613 ID=JPsnpHou00613; Name=JPsnpHou00613; organism=Pyrus pyrifolia; type=genetic_marker; length=605bp GGAGTAGTCTTTGAGATCATCATCACCTTTGCTTTGGTTTACACTGTCTA TGCAACAGCAGCTGACCCCAAGAAGGGCTCGTTGGGCACCATTGCTCCCA TCGCCATCGGTTTCATTGTCGGGGCTAACATCTTGGCTGCCGGACCATTC TCCGGTGGGTCAATGAACCCGGCCCGGTCTTTCGGTCCTGCCGTTGCTAG CGGCGACTTCCACGACAACTGGATCTACTGGGTTGGACCCCTCATTGGTG GTGGACTTGCTGGCCTTATCTATGGAAACGTATTTATACACTCAGAACAT GCACCCTTAGTyAGCGAGTACTGATAACTTGGTTGAGATTTAATTTGTTG CAAATGTGTTCCAGTGTATCATTTGTAATAAAAGGAGGAAGnGCAATTTT CTTTTGTTCTTTACTTCTTTTTGTCTTCAAGTTTTCAGTTATTTATTCTC ACTTTCCCAGCTTGGAACCTCCATTTTCTTGTGCTGTTTGTAAAGCCCTT TTTGTAGGTCACTTTTTCCTTGTGAATAATGAATGAAGTCGGTGATTTCC AAnAATGGCAAAAAAAAAAAANAAAAACTAGAGACTCGACCGAACGGACA CAACG
|