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Marker Overview
| Name | JPsnpHou00190 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A/G |
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| 5' Flanking Sequence | GGGGCCTCAGGTTAAAGGCAAAGGAAAGGATGCAGAGATACGGGCATATGACAGATTATA
AACCAGAAACTGGAGTCAACGGTTTTCGAGTAGCAGTTAAAATATGTAAATTTGCAGATG
AAATTCAAAGGCATAAGAATGAAGAGGTGTCGCTGTTTCCCTTTCAAGTTTCCGTCGAAA
AAAACGGGGTACAAAATGCTGGTTTTGGAAGCACCTAACGATTCATATGCCTGTGGAATC
CAAGTTCTCTCCCTCCTCTGCCTGCATACGTATAGCTTTTGTTCTTCAGCATG |
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| 3' Flanking Sequence | AAGTGTATTTGGTTCTTTGTTTTGTGTTCCCACCTCTTACTTAGTTCTCCTGAAATTCAC
AATTGTAATTGTAAAAAAGAAAAAAAAGCAAGAAAAAAATGATAGTTTATTTATGAAAAT
ATTCATACAGCTGAGCGCAATGGCCTTAGAGAATTCATACAGACGACGCTATTTAGCGGT
ATAAGACATTGTTATGTTAAAGT |
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| Species | Pyrus pyrifolia |
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| Publication | [view all] |
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| Contact | Toshiya Yamamoto
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| Comment | SNP position in sequence: 294 |
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Publications
| Year | Publication |
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| 2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00190 ID=JPsnpHou00190; Name=JPsnpHou00190; organism=Pyrus pyrifolia; type=genetic_marker; length=497bp
GGGGCCTCAGGTTAAAGGCAAAGGAAAGGATGCAGAGATACGGGCATATG
ACAGATTATAAACCAGAAACTGGAGTCAACGGTTTTCGAGTAGCAGTTAA
AATATGTAAATTTGCAGATGAAATTCAAAGGCATAAGAATGAAGAGGTGT
CGCTGTTTCCCTTTCAAGTTTCCGTCGAAAAAAACGGGGTACAAAATGCT
GGTTTTGGAAGCACCTAACGATTCATATGCCTGTGGAATCCAAGTTCTCT
CCCTCCTCTGCCTGCATACGTATAGCTTTTGTTCTTCAGCATGrAAGTGT
ATTTGGTTCTTTGTTTTGTGTTCCCACCTCTTACTTAGTTCTCCTGAAAT
TCACAATTGTAATTGTAAAAAAGAAAAAAAAGCAAGAAAAAAATGATAGT
TTATTTATGAAAATATTCATACAGCTGAGCGCAATGGCCTTAGAGAATTC
ATACAGACGACGCTATTTAGCGGTATAAGACATTGTTATGTTAAAGT
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