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Marker Overview
Name | JPsnpHou00500 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/C |
5' Flanking Sequence | CATAGATCCGGTGGAGTTGGTGGCAAGATTAAGGAAGCTTTACCATACTGAGATAGTCTC
AGTCGGACCGGCAAAGGAGGAGAAGAAGAAGGAGGAGCCAAAGAAGGAGCAGCCAAAGAA
GGAGGAGCCGAAGAAGAAAGATCCAAAGGAGGAATTGGCTGAGGCTATGAGGGCCTACCA
AGCTCAGTATCCTCCAATGCCTGCATATTACTGCGTAAGAAGTGCAGAAGAGGATCCCAA
TTCTTGTGTCATTTGCTGAATGGTTGGTAAAATTTTATTGACATGCA |
3' Flanking Sequence | GGTGTTTTTCAAGAGGAGAAATCGGATGTACATAGTTGGTATTGGTATTGGCTTTCTATG
ATCTAGAAGTATCTGTGGTATTTTTATGTACTATTTTGTATTTTTCTTTTGGTGCGGACA
CCAAACTTGTGATCAAGAAGGCTAAAATGTTTCTGTGAGTCTTTTCAATTTCCGAAAAGA
ATGGATAGTCGTGACTTGCCACCAGTT |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 288 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00500 ID=JPsnpHou00500; Name=JPsnpHou00500; organism=Pyrus pyrifolia; type=genetic_marker; length=495bp CATAGATCCGGTGGAGTTGGTGGCAAGATTAAGGAAGCTTTACCATACTG AGATAGTCTCAGTCGGACCGGCAAAGGAGGAGAAGAAGAAGGAGGAGCCA AAGAAGGAGCAGCCAAAGAAGGAGGAGCCGAAGAAGAAAGATCCAAAGGA GGAATTGGCTGAGGCTATGAGGGCCTACCAAGCTCAGTATCCTCCAATGC CTGCATATTACTGCGTAAGAAGTGCAGAAGAGGATCCCAATTCTTGTGTC ATTTGCTGAATGGTTGGTAAAATTTTATTGACATGCAyGGTGTTTTTCAA GAGGAGAAATCGGATGTACATAGTTGGTATTGGTATTGGCTTTCTATGAT CTAGAAGTATCTGTGGTATTTTTATGTACTATTTTGTATTTTTCTTTTGG TGCGGACACCAAACTTGTGATCAAGAAGGCTAAAATGTTTCTGTGAGTCT TTTCAATTTCCGAAAAGAATGGATAGTCGTGACTTGCCACCAGTT
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