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Marker Overview
Name | JPsnpHou00378 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/C |
5' Flanking Sequence | CTACAACATGCCATGCACTGTAGAATCAGCTTCGCTGGAACCAAAGTTCGGGAACAAGTT
CATTGCCGGGGGAGAAGACATGTGGGTTCATGTATTTGATTTCCATACTGGTGAAGAGAT
CGCATGCAACAAGGGTCACCACGGTCCAGTTCACTGTTTGCGATTCTCGCCAGGAGGGGA
ATCATACGCCTCAGGATCTGAAGATGGCACCATTAGAATATGGCAGACCGGGCCCTTGAC
TCCAGATGAAGC |
3' Flanking Sequence | GAGGCTAATGGGTCAGTTGGAAAGGTGAAGGTACCCGCAGAAGAGGTTTCTCACAAGATC
GAGGGGTTCCACATCACAGAAGAGGGAAAAGCGAAAGAGAAGGAAGAGGCAGCGGTGAAC
GAGTGAAGTGGTCCAAGAGTATATGTAGCCAATGCCTTTCATATTTGAGATCTATCCATC
CTAGTTTGATTACTTCATTACATAGACAGACTAAAACAAGAATTTTTGTACAACTTTTAG
CTCACTGCTTTTCGTTACCGAAACATCGACCGGACAAATGAATGTTACTGCATATTATCC
CTTTT |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 253 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00378 ID=JPsnpHou00378; Name=JPsnpHou00378; organism=Pyrus pyrifolia; type=genetic_marker; length=558bp CTACAACATGCCATGCACTGTAGAATCAGCTTCGCTGGAACCAAAGTTCG GGAACAAGTTCATTGCCGGGGGAGAAGACATGTGGGTTCATGTATTTGAT TTCCATACTGGTGAAGAGATCGCATGCAACAAGGGTCACCACGGTCCAGT TCACTGTTTGCGATTCTCGCCAGGAGGGGAATCATACGCCTCAGGATCTG AAGATGGCACCATTAGAATATGGCAGACCGGGCCCTTGACTCCAGATGAA GCyGAGGCTAATGGGTCAGTTGGAAAGGTGAAGGTACCCGCAGAAGAGGT TTCTCACAAGATCGAGGGGTTCCACATCACAGAAGAGGGAAAAGCGAAAG AGAAGGAAGAGGCAGCGGTGAACGAGTGAAGTGGTCCAAGAGTATATGTA GCCAATGCCTTTCATATTTGAGATCTATCCATCCTAGTTTGATTACTTCA TTACATAGACAGACTAAAACAAGAATTTTTGTACAACTTTTAGCTCACTG CTTTTCGTTACCGAAACATCGACCGGACAAATGAATGTTACTGCATATTA TCCCTTTT
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