JPsnpHou00490, JPsnpHou00490 (genetic_marker) Pyrus pyrifolia

Marker Overview


Name	JPsnpHou00490
dbSNP ID	N/A
Type	SNP
SNP Alleles	T/C
5' Flanking Sequence	TCTCTCTGCCCCTTGTAGTTTGCTTTCTCCCATCAAACTTGGTAAGTATGGGTAGAGCAA CCTTCCTCGAGATCATCCTCGCCATCCTCTTGCCACCTCTTGGTGTCTTCCTCAAGTATG AGTGTCGTGCGGAATTTTGGATCTGTTTGGTGCTGACACTGTTTGGTTACCTTCCTGGTA TTATATATGCCATCTATATCCTCACCAAGTGATCCTTTCAATTTATGTGGTAAAGGATGT GTTCGAAGGG
3' Flanking Sequence	GGCTGTGTCTTTTTGTTTAGATATCAAGGGTTTATTTTCnACCGTTTGATGGATTGTACT TATCTGGTGTAGCCAGATGGATGGTTGATACTCCATTATGTAGTGTGTATCTACTGTCGT TGTTCATTGTTTTTTTCCTTTTTTTTCTTTCCTTTTGATTTGAATAAATGCCTCATATTT GACTATTTCCAGA
Species	Pyrus pyrifolia
Publication	[view all]
Contact	Toshiya Yamamoto
Comment	SNP position in sequence: 251

Contact

Name

Details

Toshiya Yamamoto

First name:	Toshiya
Last name:	Yamamoto
Institution:	National Institute of Fruit Tree Science, Graduate School of Life and Environmental Sciences, University of Tsukuba
Address:	National Institute of Fruit Tree Science, 2-1 Fujimoto, Tsukuba, Ibaraki 305-8605, Japan
Country:	Japan
Email:	toshiya@affrc.go.jp
Last update:	Apr 2014

Publications


Year	Publication
2014	Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863.

Sequence

>JPsnpHou00490 ID=JPsnpHou00490; Name=JPsnpHou00490; organism=Pyrus pyrifolia; type=genetic_marker; length=444bp
TCTCTCTGCCCCTTGTAGTTTGCTTTCTCCCATCAAACTTGGTAAGTATG
GGTAGAGCAACCTTCCTCGAGATCATCCTCGCCATCCTCTTGCCACCTCT
TGGTGTCTTCCTCAAGTATGAGTGTCGTGCGGAATTTTGGATCTGTTTGG
TGCTGACACTGTTTGGTTACCTTCCTGGTATTATATATGCCATCTATATC
CTCACCAAGTGATCCTTTCAATTTATGTGGTAAAGGATGTGTTCGAAGGG
yGGCTGTGTCTTTTTGTTTAGATATCAAGGGTTTATTTTCnACCGTTTGA
TGGATTGTACTTATCTGGTGTAGCCAGATGGATGGTTGATACTCCATTAT
GTAGTGTGTATCTACTGTCGTTGTTCATTGTTTTTTTCCTTTTTTTTCTT
TCCTTTTGATTTGAATAAATGCCTCATATTTGACTATTTCCAGA