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Marker Overview
Name | JPsnpHou00520 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/C |
5' Flanking Sequence | GTTGTTATTCCCGTGCCGACTGGAACTAAATCTAGGTTCGTTGTGTGTGAGATCAAGAAG
AATCATCTGAAGTTTGGACTGAAGGGGCAGCCTCCGATCATCGATGGTGAACTTTTTCAA
GCTATCAAGCCTGATGATTGTTACTGGAGCATAGAGGACCAGAGTGCCGTCTCAATTCTT
CTGACCAAGCACAACCAAATGGAGTGGTGGAAAAGTCTGGTGAAAGGTGATCC |
3' Flanking Sequence | GAGATCGACACTCAAAAGGTTGAGCCTGAGCCCAGCAAACTGTCTGACCTGGATTCTGAA
ACGCGCCAGACTGTTGAAAAGATGATGTTTGACCAGAGACAGAAGCAGATGGGGCTCCCC
ACTAGCGAGGAGATGCAAAAGCAGGAAATCTTAAAGAAGTTCATGTCCGAGCATCCGGAG
ATGGACTTCTCAAGGGCCAAGATACAGTAAATCTGAGTTGTTCAGTTCACAGACTATTAA
CTTTTGAGTTTGATTAGAAGGGAGAGAGGAAAAAGAACTTACGTTACAAGACTACTGACT
TAATATTGTTTAGAAAACAATGGATGTCATCGGTGTGCTGTCTTTTTACGGGTGTTTAGG
GTGTCTAATTTGGCTCGAACGCTGTTAATATTGTGGGATCTGGTTCATTTCNGGATAATA
GTTTGATTA |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 234 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00520 ID=JPsnpHou00520; Name=JPsnpHou00520; organism=Pyrus pyrifolia; type=genetic_marker; length=663bp GTTGTTATTCCCGTGCCGACTGGAACTAAATCTAGGTTCGTTGTGTGTGA GATCAAGAAGAATCATCTGAAGTTTGGACTGAAGGGGCAGCCTCCGATCA TCGATGGTGAACTTTTTCAAGCTATCAAGCCTGATGATTGTTACTGGAGC ATAGAGGACCAGAGTGCCGTCTCAATTCTTCTGACCAAGCACAACCAAAT GGAGTGGTGGAAAAGTCTGGTGAAAGGTGATCCyGAGATCGACACTCAAA AGGTTGAGCCTGAGCCCAGCAAACTGTCTGACCTGGATTCTGAAACGCGC CAGACTGTTGAAAAGATGATGTTTGACCAGAGACAGAAGCAGATGGGGCT CCCCACTAGCGAGGAGATGCAAAAGCAGGAAATCTTAAAGAAGTTCATGT CCGAGCATCCGGAGATGGACTTCTCAAGGGCCAAGATACAGTAAATCTGA GTTGTTCAGTTCACAGACTATTAACTTTTGAGTTTGATTAGAAGGGAGAG AGGAAAAAGAACTTACGTTACAAGACTACTGACTTAATATTGTTTAGAAA ACAATGGATGTCATCGGTGTGCTGTCTTTTTACGGGTGTTTAGGGTGTCT AATTTGGCTCGAACGCTGTTAATATTGTGGGATCTGGTTCATTTCNGGAT AATAGTTTGATTA
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