Clyde | GDR

Germplasm Overview


Name	Clyde
Alias	N/A
Institutional Name	Clyde
Sample Name	EY0052703_CLT2_CLT2_snapper_rubus.cel
GRIN ID	PI 553265
Type	Cultivar
Species	Rubus neglectus
Description	Clyde
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 48]
SSR Genotype Data	N/A
SNP Genotype Data	[view all 12438]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications.. G3 (Bethesda, Md.). 2023 Aug 11.

Publications


Year	Publication
2023	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications. G3 (Bethesda, Md.). 2023 Aug 11. DOI: 10.1093/g3journal/jkad170

Snp Genotype Data

Total 12,438 records

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#	Dataset	Marker Name	Allele	Genotype
1	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-115251414	Y	T\|T
2	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-159144814	Y	C\|C
3	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-159212454	R	A\|A
4	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-166513670	Y	T\|T
5	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-184403348	R	A\|A
6	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-184752440	M	C\|C
7	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-208713277	Y	C\|C
8	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-226069626	R	G\|G
9	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096548	R	A\|A
10	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096550	R	A\|G
11	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096555	R	G\|G
12	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096558	Y	T\|T
13	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096559	M	A\|C
14	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096560	R	A\|G
15	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096584	Y	T\|C
16	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096589	R	A\|A
17	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096590	K	T\|G
18	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096592	Y	T\|T
19	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096597	Y	C\|C
20	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096602	R	A\|G
21	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096606	R	A\|A
22	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096610	R	G\|G
23	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096611	R	A\|G
24	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096612	R	A\|G
25	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096618	R	G\|G

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Cross References

External references for this accession


Database	Accession
GRIN	PI 553265

Phenotypic Data

Total 48 trait scores

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#	Dataset	Descriptor	Value
1	RUBUS.CORE.1998	CORE	0
2	RUBUS.CORE.1998	CORE	0
3	RUBUS.CORVALLIS.86	BLOOM1	136
4	RUBUS.CORVALLIS.86	BLOOM1	136
5	RUBUS.CORVALLIS.87	BLOOM1	130
6	RUBUS.CORVALLIS.87	BLOOM1	130
7	RUBUS.CORVALLIS.87	FLOWERDENS	6
8	RUBUS.CORVALLIS.87	FLOWERDENS	6
9	RUBUS.CORVALLIS.87	FRUITSIZE	3.1
10	RUBUS.CORVALLIS.87	FRUITSIZE	3.1
11	RUBUS.CORVALLIS.87	FULLBLOOM	136
12	RUBUS.CORVALLIS.87	FULLBLOOM	136
13	RUBUS.CORVALLIS.87	RIPE1	178
14	RUBUS.CORVALLIS.87	RIPE1	178
15	RUBUS.CORVALLIS.87	RIPE2	198
16	RUBUS.CORVALLIS.87	RIPE2	198
17	RUBUS.CORVALLIS.88	FRUITSET	6
18	RUBUS.CORVALLIS.88	FRUITSET	6
19	RUBUS.CORVALLIS.STD	DRUPLETS	6
20	RUBUS.CORVALLIS.STD	DRUPLETS	6
21	RUBUS.CORVALLIS.STD	FIRMNESS	6
22	RUBUS.CORVALLIS.STD	FIRMNESS	6
23	RUBUS.CORVALLIS.STD	FLAVOR	3
24	RUBUS.CORVALLIS.STD	FLAVOR	3
25	RUBUS.CORVALLIS.STD	FRUITCOLOR	dp

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