PI 553248

Germplasm Overview


Name	PI 553248
Alias	N/A
Institutional Name	CRUB 68 .001
Sample Name	EY0052440_CLT2_CLT5_trevally_rubus.cel
GRIN ID	PI 553248
Type	Cultivar
Species	Rubus hybrid
Description	N/A
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 52]
SSR Genotype Data	N/A
SNP Genotype Data	[view all 3090]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications.. G3 (Bethesda, Md.). 2023 Aug 11.

Alias


Synonym
Cheyenne

Publications


Year	Publication
2023	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications. G3 (Bethesda, Md.). 2023 Aug 11. DOI: 10.1093/g3journal/jkad170

Snp Genotype Data

Total 3,090 records

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#	Dataset	Marker Name	Allele	Genotype
1	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-115251414	Y	4
2	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-159144814	Y	2
3	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-184752440	M	4
4	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096555	R	3
5	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096558	Y	2
6	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096559	M	4
7	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096590	K	1
8	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096612	R	1
9	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096631	R	4
10	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096671	R	4
11	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096688	M	2
12	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096693	K	2
13	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096707	M	2
14	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096733	R	4
15	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096814	M	2
16	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096835	R	1
17	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096915	S	2
18	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096922	Y	2
19	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096983	R	4
20	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566096987	K	4
21	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566097007	Y	4
22	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566097013	Y	4
23	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566097056	R	3
24	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566097063	K	1
25	Rubus-SNP array validation panel-Montanari-2023-4x	Rub_AX-566097094	R	1

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Cross References

External references for this accession


Database	Accession
GRIN	PI 553248

Phenotypic Data

Total 52 trait scores

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#	Dataset	Descriptor	Value
1	1995_Thompson_Count	CHROMOCOUNT	28
2	1995_Thompson_Count	CHROMOCOUNT	28
3	1995_Thompson_Count	PLOIDYEQUA	2n = 4x = 28
4	1995_Thompson_Count	PLOIDYEQUA	2n = 4x = 28
5	RUBUS.CORE.1998	CORE	0
6	RUBUS.CORE.1998	CORE	0
7	RUBUS.CORVALLIS.86	BLOOM1	136
8	RUBUS.CORVALLIS.86	BLOOM1	136
9	RUBUS.CORVALLIS.87	BLOOM1	122
10	RUBUS.CORVALLIS.87	BLOOM1	122
11	RUBUS.CORVALLIS.87	FLOWERDENS	9
12	RUBUS.CORVALLIS.87	FLOWERDENS	9
13	RUBUS.CORVALLIS.87	FRUITSIZE	7.8
14	RUBUS.CORVALLIS.87	FRUITSIZE	7.8
15	RUBUS.CORVALLIS.87	FULLBLOOM	133
16	RUBUS.CORVALLIS.87	FULLBLOOM	133
17	RUBUS.CORVALLIS.87	RIPE1	196
18	RUBUS.CORVALLIS.87	RIPE1	196
19	RUBUS.CORVALLIS.87	RIPE2	230
20	RUBUS.CORVALLIS.87	RIPE2	230
21	RUBUS.CORVALLIS.88	FRUITSET	5
22	RUBUS.CORVALLIS.88	FRUITSET	5
23	RUBUS.CORVALLIS.STD	DRUPLETS	7
24	RUBUS.CORVALLIS.STD	DRUPLETS	7
25	RUBUS.CORVALLIS.STD	FIRMNESS	7

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