pspp_matK_747_2

Marker Overview

Name

pspp_matK_747_2

dbSNP ID

N/A

SNP Array ID

Cherry 6+9K SNP array:

pspp_matK_747_2

Type

SNP

SNP Alleles

C/T

5' Flanking Sequence

TTCTCATTTACAATTAACCTCTTCTGGGATCTTTTTTGAGCGAATACATTTCTATGAAAA AATAAAA

3' Flanking Sequence

ATCCGGTAGAAAAAGTCTTTGCTAATGATTTTCCGGCCTCCATCTTATGGTT

Species

Prunus sp.

Publication

[view all]

Contact

Stijn Vanderzande

Comment

From chloroplast; polymorphic between P. avium and P. cerasus

Contact

Name

Details

Stijn Vanderzande

First name:	Stijn
Last name:	Vanderzande
Address:	Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:	Belgium
Email:	stijn.vanderzande@wsu.edu

Libraries


Library Name	Type
Cherry 6+9K SNP array	SNP_chip

Publications


Year	Publication
2020	Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x

Sequence

>pspp_matK_747_2 ID=pspp_matK_747_2; Name=pspp_matK_747_2; organism=Prunus sp.; type=genetic_marker; length=120bp
TTCTCATTTACAATTAACCTCTTCTGGGATCTTTTTTGAGCGAATACATT
TCTATGAAAAAATAAAAYATCCGGTAGAAAAAGTCTTTGCTAATGATTTT
CCGGCCTCCATCTTATGGTT