GH17_2

Marker Overview
NameGH17_2
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:GH17_2
TypeSNP
SNP AllelesT/C
5' Flanking SequenceATTTGTTGAATTGGATGGTTATAGAACAGTGTATATCTATTCTGTGTGAT
3' Flanking SequenceATTTATAGTGGGTAGTTGGTTTCTTGAAGAAATTGGGTTTAGATATTTCA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Commentsweet cherry SNPs from ESTs discovered by Castede et al (2015)
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20207N/A68.41GH17_2View
Sequence
>GH17_2 ID=GH17_2; Name=GH17_2; organism=Prunus avium; type=genetic_marker; length=101bp
ATTTGTTGAATTGGATGGTTATAGAACAGTGTATATCTATTCTGTGTGAT
YATTTATAGTGGGTAGTTGGTTTCTTGAAGAAATTGGGTTTAGATATTTC
A
Alignments
Feature NameTypeLocationAnalysis
Pp07 chromosome Pp07:20934207..20934207. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr7 chromosome PAV_r1.0chr7:18398610..18398610. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)