scaffold_8:21802944

Marker Overview
Namescaffold_8:21802944
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:scaffold_8:21802944
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTATACCTCAATCCCAAATCCAAGCCCACTCCAAAAGAAAAAGTACTTTTCTTATCCCAA GACTGAAAAGCTTCTCTCTATTTCTTTTTTCTTTTTTCTTC
3' Flanking SequenceCTCTTTTCTCTCACCCTAGCTAGGTGCTTCTCTCTCTCATTTCTTCTCTCTTTCTTCTCT TCTCTCCTGAAGAAAATCCTAGCCACCATTTTTTCTCGCTT
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Commentweet cherry SNPs identified by Peace et al (2012) that were not used for the original 6K SNP array - intergenic SNPs
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20208N/A69.31scaffold_8:21802944View
Sequence
>scaffold_8:21802944 ID=scaffold_8:21802944; Name=scaffold_8:21802944; organism=Prunus avium; type=genetic_marker; length=203bp
TTATACCTCAATCCCAAATCCAAGCCCACTCCAAAAGAAAAAGTACTTTT
CTTATCCCAAGACTGAAAAGCTTCTCTCTATTTCTTTTTTCTTTTTTCTT
CYCTCTTTTCTCTCACCCTAGCTAGGTGCTTCTCTCTCTCATTTCTTCTC
TCTTTCTTCTCTTCTCTCCTGAAGAAAATCCTAGCCACCATTTTTTCTCG
CTT
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:22547172..22547172. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr8 chromosome PAV_r1.0chr8:31809..31809. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)