S6_27456841

Marker Overview
NameS6_27456841
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:S6_27456841
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGGCCCATGGCCTAGGTTGGTGACCTCCATTGCACTTAGGAGGGGTGCCTG
3' Flanking SequenceCTATGGTCTCCTCAAGTAGGAGAGCCAATGTCATAATTTGTTGCCGAGGG
SpeciesPrunus cerasus
Publication[view all]
ContactStijn Vanderzande
CommentSNPs identified from GBS on P. fruticosa by Barac (2016) which were used to represent SNPs of the fruticosa subgenome of tart cherry
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20206N/A100.21S6_27456841View
Sequence
>S6_27456841 ID=S6_27456841; Name=S6_27456841; organism=Prunus cerasus; type=genetic_marker; length=101bp
GGCCCATGGCCTAGGTTGGTGACCTCCATTGCACTTAGGAGGGGTGCCTG
YCTATGGTCTCCTCAAGTAGGAGAGCCAATGTCATAATTTGTTGCCGAGG
G
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:29321447..29321447. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr6 chromosome PAV_r1.0chr6:23022952..23022952. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)