scaffold_2:11627774

Marker Overview
Namescaffold_2:11627774
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:scaffold_2:11627774
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTGTAATTTCCAAGGAGATCTTGTTCTTACAAAGTTTGTTTATTTAATGCATTTCCTTTT TGAACATTTTAATAATTTATCAGGTCATAAGCACTTGGGGC
3' Flanking SequenceTTCGTAACAACATTGACTTCCTCTCATTGTCATATACCCGTCATGCTGAAGATGTTCGCC ACGTAAGGACTGTTCTCCCTGTTATGATTTTCTGGTGTTAA
SpeciesPrunus cerasus
Publication[view all]
ContactStijn Vanderzande
Commentntragenic SNPs representing the fruticosa subgenome of tart cherry identified by Peace et al (2012) but not used for the original 6K SNP array
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Sequence
>scaffold_2:11627774 ID=scaffold_2:11627774; Name=scaffold_2:11627774; organism=Prunus cerasus; type=genetic_marker; length=203bp
TTGTAATTTCCAAGGAGATCTTGTTCTTACAAAGTTTGTTTATTTAATGC
ATTTCCTTTTTGAACATTTTAATAATTTATCAGGTCATAAGCACTTGGGG
CRTTCGTAACAACATTGACTTCCTCTCATTGTCATATACCCGTCATGCTG
AAGATGTTCGCCACGTAAGGACTGTTCTCCCTGTTATGATTTTCTGGTGT
TAA
Alignments
Feature NameTypeLocationAnalysis
Pp02 chromosome Pp02:14406071..14406071. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:7333041..7333041. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)