scaffold_4:29279255

Marker Overview
Namescaffold_4:29279255
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:scaffold_4:29279255
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGCGGTGGAGGGGACTTTGATGGGGTTTCTGAGAATGAGTTTGAGATTCATTATCAAGAGC CTCCTGAGAGTTACTTTGGTAAGTTTAAGAGGAATTGGGCT
3' Flanking SequenceTGCATTTTGGCTTCTTGATTGTCATTTATGGCTTCATGGTGGCTTCCTCTGTTGTTCTCC TCTGTTTTTAGGTTTTTTATTTTCCTGTGATTAAGGTGAAA
SpeciesPrunus cerasus
Publication[view all]
ContactStijn Vanderzande
Commentntragenic SNPs representing the fruticosa subgenome of tart cherry identified by Peace et al (2012) but not used for the original 6K SNP array
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20206N/A54.55scaffold_4:29279255View
Sequence
>scaffold_4:29279255 ID=scaffold_4:29279255; Name=scaffold_4:29279255; organism=Prunus cerasus; type=genetic_marker; length=203bp
GCGGTGGAGGGGACTTTGATGGGGTTTCTGAGAATGAGTTTGAGATTCAT
TATCAAGAGCCTCCTGAGAGTTACTTTGGTAAGTTTAAGAGGAATTGGGC
TYTGCATTTTGGCTTCTTGATTGTCATTTATGGCTTCATGGTGGCTTCCT
CTGTTGTTCTCCTCTGTTTTTAGGTTTTTTATTTTCCTGTGATTAAGGTG
AAA
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:15387886..15387886. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)