AX-105175278

Marker Overview

Name

AX-105175278

dbSNP ID

N/A

SNP Array ID

50K SNP array for apple:

AX-105175278

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

AGAACCTCTAAGAGATACTCACAACCTTTTTTGTC

3' Flanking Sequence

TCATCTCTGGATAATTGGGTCAATAACTGGACTAA

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
50K SNP array for apple	SNP_chip

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr04	chromosome	Chr04:1427518..1427518 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-BB-F1	4	N/A	3.52	AX-105175278	View
2	Apple-NC-F1	4	N/A	2.68	AX-105175278	View
3	Apple-NCZFBB-consensus	4	N/A	1.76	AX-105175278	View
4	Apple-ZF-F1	4	N/A	0.57	AX-105175278	View

Sequence

>AX-105175278 ID=AX-105175278; Name=AX-105175278; organism=Malus x domestica; type=genetic_marker; length=71bp
AGAACCTCTAAGAGATACTCACAACCTTTTTTGTCRTCATCTCTGGATAA
TTGGGTCAATAACTGGACTAA