AX-105175339

Marker Overview

Name

AX-105175339

dbSNP ID

N/A

SNP Array ID

50K SNP array for apple:

AX-105175339

Type

SNP

SNP Alleles

T/C

5' Flanking Sequence

GAAACCCATGAACTCATCAAGCTCAAAATCCTTCC

3' Flanking Sequence

TTGATTTGAGATCATTCTTCCATGGCGTCAACATT

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
50K SNP array for apple	SNP_chip

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-BB-F1	16	N/A	35.63	AX-105175339	View
2	Apple-NC-F1	16	N/A	48.08	AX-105175339	View
3	Apple-NCZFBB-consensus	16	N/A	41.58	AX-105175339	View
4	Apple-ZF-F1	16	N/A	40.44	AX-105175339	View

Sequence

>AX-105175339 ID=AX-105175339; Name=AX-105175339; organism=Malus x domestica; type=genetic_marker; length=71bp
GAAACCCATGAACTCATCAAGCTCAAAATCCTTCCYTTGATTTGAGATCA
TTCTTCCATGGCGTCAACATT

Alignments

Feature Name	Type	Location	Analysis
Chr16	chromosome	Chr16:10439902..10439902.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation