AX-105175541

Marker Overview

Name

AX-105175541

dbSNP ID

N/A

SNP Array ID

50K SNP array for apple:

AX-105175541

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

CTGGTGTATGAGTTTTTGCCAAAAGGAAGCCTAGA

3' Flanking Sequence

AATCATCTGTTTAGAAGTAAGTAATGTATTCTTCT

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
50K SNP array for apple	SNP_chip

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr13	chromosome	Chr13:5402197..5402197 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-BB-F1	13	N/A	22.61	AX-105175541	View
2	Apple-NC-F1	13	N/A	29.98	AX-105175541	View
3	Apple-NCZFBB-consensus	13	N/A	22.92	AX-105175541	View
4	Apple-ZF-F1	13	N/A	19.98	AX-105175541	View

Sequence

>AX-105175541 ID=AX-105175541; Name=AX-105175541; organism=Malus x domestica; type=genetic_marker; length=71bp
CTGGTGTATGAGTTTTTGCCAAAAGGAAGCCTAGARAATCATCTGTTTAG
AAGTAAGTAATGTATTCTTCT