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DM16HB6
Haplotype Block Overview
Alignments
Haplotypes
Map Positions
Projects
Publications
Stock Haplotype
Haplotype Block Overview
Name
DM16HB6
Species
Malus x domestica
Stock Haplotype
[
view all 21
]
Haplotype
[
view all
]
Alignments
The following features are aligned
Feature Name
Type
Location
Analysis
Reference
Chr16
chromosome
Chr16:2949664..3042393 .
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8
Publications
Year
Publication
2020
Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8
Stock Haplotype
Name
Haplotype
Cox's Orange Pippin
3
Golden Delicious
3 4
Fuji
3 4
Gala
3 4
Elstar
3
Cripps Pink
3 7
Granny Smith
6
Ralls Janet
3 4
Delicious
3 4
Ingrid Marie
3
Braeburn
4 6
Delcorf
3 4
Jongrimes
3 5
Kidd's Orange Red
3
Lady Williams
6 7
Winesap
3 4
Grimes Golden
3 4
Zari
3
B3F44
4 6
B3FS1
4 5
Nicore
4 6
Map Positions
Haplotype Block
Map Name
Linkage Group
Start
Stop
DM16HB6
Apple-NCZFBB-consensus
16
15.77
15.77
Projects
Project Name
Apple_Haplotype_Rymenants_2020
Haplotypes
Marker
3
4
5
6
7
8
AX-105185293
A
B
A
B
B
B
AX-105198122
B
B
B
B
A
B
AX-105201198
A
B
B
A
A
B
AX-105208781
A
B
B
B
B
A
AX-105217264
B
A
A
B
B
A
FB_AFFY_3887449
B
A
B
A
A
A
GDsnp01588
B
A
B
A
A
B
RosBREEDSNP_SNP_CA_1187517_Lg16_01588_MAF10_545103_exon1
B
B
B
A
A
B
RosBREEDSNP_SNP_GA_1225178_Lg16_01588_MAF30_278806_exon1
B
B
B
B
B
A