BZIP8, HM122481.1-BZIP8.m1 (mRNA) Malus x domestica

Overview


Name	BZIP8
Unique Name	HM122481.1-BZIP8.m1
Type	mRNA
Organism	Malus x domestica (Apple)

Relationships

This mRNA is associated with the following gene feature(s):


Feature Name	Unique Name	Species	Type
BZIP8	BZIP8	Malus x domestica	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122481.1-BZIP8.m1-cds1	HM122481.1-BZIP8.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
BZIP8	HM122481.1-BZIP8.p1	Malus x domestica	polypeptide

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2014-12-31

Alignments

Feature Name	Type	Location	Analysis
HM122481	region	HM122481:70..681+	NCBI Rosaceae gene and mRNA sequences
chr13	chromosome	chr13:10499728..10501099-	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr13	chromosome	chr13:10772264..10773635-	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Cross References

External references for this mRNA


Database	Accession
GI	302398651
nuccore	HM122481.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122481:70..681+
coding sequence from alignment at HM122481:70..681+

mRNA sequence

>HM122481.1-BZIP8.m1 ID=HM122481.1-BZIP8.m1|Name=BZIP8|organism=Malus x domestica|type=mRNA|length=612bp
atgttatccatctcctcctcctcctccagtttggagcaactacagcaagt
acagcagccatctggttcttcttcctcgaggcctcctcatccttctcttc
ttcttcatagtaacaccaagaacagtaacaaactagacgttccttggttt
tggtcattggatgatgatgatgatgatggtgataatgttccagaagagag
cgatgaagatatgttcacggttccggacgtggaggcgttgccccctccta
ataatagtattaataatgcggcctctacaatcgccaaagccaccagtaac
aacaacaacccagatgcccagtctggctttccggccaagcgccgccgagg
ccgaaatcccgtcgataaggagtacaggcgactgaagagattgctaagga
acagggtgtctgctcaacaagcccgggagaggaaaaaggtttacgtcaac
gatctggaatcaagagccaaagaattggatgataggaattcaaagttgga
agaaaagatctctacgcttgtcaatgaaaacgccatgcttcgaaaggttc
ttatgaacacaaggccaaaagtggacgaaagtattgagcaaaagcaagga
tcagttaagtaa

protein sequence of BZIP8

>HM122481.1-BZIP8.p1 ID=HM122481.1-BZIP8.p1|Name=BZIP8|organism=Malus x domestica|type=polypeptide|length=203bp
MLSISSSSSSLEQLQQVQQPSGSSSSRPPHPSLLLHSNTKNSNKLDVPWF
WSLDDDDDDGDNVPEESDEDMFTVPDVEALPPPNNSINNAASTIAKATSN
NNNPDAQSGFPAKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVN
DLESRAKELDDRNSKLEEKISTLVNENAMLRKVLMNTRPKVDESIEQKQG
SVK

mRNA from alignment at HM122481:70..681+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122481.1-BZIP8.m1 ID=HM122481.1-BZIP8.m1|Name=BZIP8|organism=Malus x domestica|type=mRNA|length=612bp|location=Sequence derived from alignment at HM122481:70..681+ (Malus x domestica)
atgttatccatctcctcctcctcctccagtttggagcaactacagcaagt
acagcagccatctggttcttcttcctcgaggcctcctcatccttctcttc
ttcttcatagtaacaccaagaacagtaacaaactagacgttccttggttt
tggtcattggatgatgatgatgatgatggtgataatgttccagaagagag
cgatgaagatatgttcacggttccggacgtggaggcgttgccccctccta
ataatagtattaataatgcggcctctacaatcgccaaagccaccagtaac
aacaacaacccagatgcccagtctggctttccggccaagcgccgccgagg
ccgaaatcccgtcgataaggagtacaggcgactgaagagattgctaagga
acagggtgtctgctcaacaagcccgggagaggaaaaaggtttacgtcaac
gatctggaatcaagagccaaagaattggatgataggaattcaaagttgga
agaaaagatctctacgcttgtcaatgaaaacgccatgcttcgaaaggttc
ttatgaacacaaggccaaaagtggacgaaagtattgagcaaaagcaagga
tcagttaagtaa

Coding sequence (CDS) from alignment at HM122481:70..681+

>HM122481.1-BZIP8.m1 ID=HM122481.1-BZIP8.m1|Name=BZIP8|organism=Malus x domestica|type=CDS|length=612bp|location=Sequence derived from alignment at HM122481:70..681+ (Malus x domestica)
atgttatccatctcctcctcctcctccagtttggagcaactacagcaagt
acagcagccatctggttcttcttcctcgaggcctcctcatccttctcttc
ttcttcatagtaacaccaagaacagtaacaaactagacgttccttggttt
tggtcattggatgatgatgatgatgatggtgataatgttccagaagagag
cgatgaagatatgttcacggttccggacgtggaggcgttgccccctccta
ataatagtattaataatgcggcctctacaatcgccaaagccaccagtaac
aacaacaacccagatgcccagtctggctttccggccaagcgccgccgagg
ccgaaatcccgtcgataaggagtacaggcgactgaagagattgctaagga
acagggtgtctgctcaacaagcccgggagaggaaaaaggtttacgtcaac
gatctggaatcaagagccaaagaattggatgataggaattcaaagttgga
agaaaagatctctacgcttgtcaatgaaaacgccatgcttcgaaaggttc
ttatgaacacaaggccaaaagtggacgaaagtattgagcaaaagcaagga
tcagttaagtaa