GDR Citations 2017

Papers citing GDR in 2017 (171)

  1. Jung, S., Lee, T., Cheng, C. H., Ficklin, S., Yu, J., Humann, J., & Main, D. (2017). Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases. Database, 2017.
  2. Yang, Q., Chen, Q., Zhu, Y., & Li, T. (2017). Identification of MdDof genes in apple and analysis of their response to biotic or abiotic stress. Functional Plant Biology, 45(5), 528-541.
  3. Du, L., Qi, S., Ma, J., Xing, L., Fan, S., Zhang, S., ... & Han, M. (2017). Identification of TPS family members in apple (Malus x domestica Borkh.) and the effect of sucrose sprays on TPS expression and floral induction. Plant Physiology and Biochemistry, 120, 10-23.
  4. Wang, L., Li, X., Wang, L., Xue, H., Wu, J., Yin, H., & Zhang, S. (2017). Construction of a high-density genetic linkage map in pear (Pyrus communis× Pyrus pyrifolia nakai) using SSRs and SNPs developed by SLAF-seq. Scientia Horticulturae, 218, 198-204.
  5. Kim, G. H., Choi, C., Han, A. R., & Noh, J. H. (2017, June). Identification of cherry rootstock (Prunus spp.) using SSR markers. In VIII International Cherry Symposium 1235 (pp. 225-232).
  6. Sablok, G., Powell, B., Braessler, J., Yu, F., & Min, X. J. (2017). Comparative landscape of alternative splicing in fruit plants. Current Plant Biology, 9, 29-36.
  7. Chen, H., Shao, H., Li, K., Zhang, D., Fan, S., Li, Y., & Han, M. (2017). Genome-wide identification, evolution, and expression analysis of GATA transcription factors in apple (Malus× domestica Borkh.). Gene, 627, 460-472.
  8. Zeng, J., Zhu, X., Haider, M. S., Wang, X., Zhang, C., & Wang, C. (2017). Genome-wide identification and analysis of the type-B authentic response regulator gene family in peach (Prunus persica). Cytogenetic and Genome Research, 151(1), 41-49.
  9. Zhu, Y., Shao, J., Zhou, Z., & Davis, R. E. (2017). Comparative transcriptome analysis reveals a preformed defense system in apple root of a resistant genotype of G. 935 in the absence of pathogen. International journal of plant genomics, 2017.
  10. WANG, Hao-jie, et al. "Identification and functional characterization of the MdHB-1 gene promoter sequence from Malus× domestica." Journal of integrative agriculture 16.8 (2017): 1730-1741.
  11. Wei, N., Tennessen, J. A., Liston, A., & Ashman, T. L. Article title: Present-day sympatry belies the evolutionary origin of a high-order polyploid. New physiologist, https://doi.org/10.1111/nph.14711
  12. Zhang, Z., Cui, H., Xing, S., Liu, X., & Chen, X. (2017). Genome-Wide Identification and Analysis of bZIP Family and their Expression in Response to Multiple Abiotic Stresses in Malus domestica. J Comput Sci Syst Biol, 10, 032-042.
  13. Zhang, Z., Cui, H., Xing, S., Liu, X., & Chen, X. (2017). Genome-Wide Identification and Analysis of bZIP Family and their Expression in Response to Multiple Abiotic Stresses in Malus domestica. J Comput Sci Syst Biol10, 032-042.
  14. Van Eck, L., & Bradeen, J. M. (2017, July). Hunting for novel disease resistance genes: observations and opportunities from the Rosaceae. In VII International Symposium on Rose Research and Cultivation 1232 (pp. 125-134).
  15. Wang, N., Guo, T., Sun, X., Jia, X., Wang, P., Shao, Y., ... & Ma, F. (2017). Functions of two Malus hupehensis (Pamp.) Rehd. YTPs (MhYTP1 and MhYTP2) in biotic-and abiotic-stress responses. Plant Science261, 18-27.
  16. Cao, Y., Han, Y., Meng, D., Li, D., Jin, Q., Lin, Y., & Cai, Y. (2017). Genome-wide analysis suggests high level of microsynteny and purifying selection affect the evolution of EIN3/EIL family in Rosaceae. PeerJ5, e3400.
  17. Zhang, Y., López-Girona, E., & Aranzana, M. J. (2017, March). Region-wide association analysis and high-throughput resequencing strategies in peach to develop molecular markers for flat fruit marker-assisted selection. In IV International Symposium on Molecular Markers in Horticulture 1203 (pp. 79-84).
  18. Huan, C., Han, S., Jiang, L., An, X., Yu, M., Xu, Y., ... & Yu, Z. (2017). Postharvest hot air and hot water treatments affect the antioxidant system in peach fruit during refrigerated storage. Postharvest Biology and Technology126, 1-14.
  19. Zhou, K., Hu, L., Li, P., Gong, X., & Ma, F. (2017). Genome-wide identification of glycosyltransferases converting phloretin to phloridzin in Malus species. Plant Science265, 131-145.
  20. Gutierrez, E., García-Villaraco, A., Lucas, J. A., Gradillas, A., Gutierrez-Mañero, F. J., & Ramos-Solano, B. (2017). Transcriptomics, targeted metabolomics and gene expression of blackberry leaves and fruits indicate flavonoid metabolic flux from leaf to red fruit. Frontiers in Plant Science8, 472.
  21. An, J. P., Liu, X., Song, L. Q., You, C. X., Wang, X. F., & Hao, Y. J. (2017). Apple RING finger E3 ubiquitin ligase MdMIEL1 negatively regulates salt and oxidative stresses tolerance. Journal of Plant Biology60(2), 137-145.
  22. Reighard, G. L., Maffit, W., Feng, T., Souza, F. B. M., Saski, C., Pio, R., & Gasic, K. (2017, June). Early thinning of peach fruit influences expression of cell growth and expansion genes. In International Symposium on Flowering, Fruit Set and Alternate Bearing 1229 (pp. 93-100).
  23. Jianping, A. N., Xin, L. I. U., Laiqing, S. O. N. G., Chunxiang, Y. O. U., Xiaofei, W. A. N. G., & Yujin, H. A. O. (2017). Functional characterization of the apple RING E3 ligase MdMIEL1 in transgenic Arabidopsis. Horticultural Plant Journal3(2), 53-59.
  24. Zhou, Z., Cong, P., Tian, Y., & Zhu, Y. (2017). Using RNA-seq data to select reference genes for normalizing gene expression in apple roots. PloS one12(9), e0185288.
  25. Opazo, M. C., Lizana, R., Stappung, Y., Davis, T. M., Herrera, R., & Moya-León, M. A. (2017). XTHs from Fragaria vesca: genomic structure and transcriptomic analysis in ripening fruit and other tissues. BMC genomics18(1), 1-11.
  26. Zhang, Q., Xiaojuan, L. I. U., Xin, L. I. U., Jiahui, W. A. N. G., Jianqiang, Y. U., Dagang, H. U., & Yujin, H. A. O. (2017). Genome-wide identification, characterization, and expression analysis of calmodulin-like proteins (CMLs) in apple. Horticultural Plant Journal3(6), 219-231.
  27. Yang, Q., Wang, S., Wu, C., Zhang, Q., Zhang, Y., Chen, Q., ... & Li, T. (2017). Malus domestica ADF1 severs actin filaments in growing pollen tubes. Functional Plant Biology44(4), 455-463.
  28. Yang, J., Gao, M., Huang, L., Wang, Y., van Nocker, S., Wan, R., ... & Gao, H. (2017). Identification and expression analysis of the apple (Malus× domestica) basic helix-loop-helix transcription factor family. Scientific Reports7(1), 1-14.
  29. Noh, Y. H., Lee, S., Whitaker, V. M., Cearley, K. R., & Cha, J. S. (2017). A high-throughput marker-assisted selection system combining rapid DNA extraction high-resolution melting and simple sequence repeat analysis: strawberry as a model for fruit crops. Journal of Berry Research7(1), 23-31.
  30. Wang, P., Sun, X., Jia, X., & Ma, F. (2017). Apple autophagy-related protein MdATG3s afford tolerance to multiple abiotic stresses. Plant Science256, 53-64.
  31. Muñoz-Sanz, J. V., Zuriaga, E., Badenes, M. L., & Romero, C. (2017). A disulfide bond A-like oxidoreductase is a strong candidate gene for self-incompatibility in apricot (Prunus armeniaca) pollen. Journal of experimental botany68(18), 5069-5078.
  32. Jianping, A., Xin, L., Laiqing, S., Chunxiang, Y., & Xiaofei, W. (2017). Functional Characterization of the Apple RING E3 Ligase MdMIEL1 in. Plant Physiol137, 13-30.
  33. Na, W., & GONG, X. Q. (2017). Genome-wide identification of the radiation sensitivity protein-23 (RAD23) family members in apple (Malus× domestica Borkh.) and expression analysis of their stress responsiveness. Journal of integrative agriculture16(4), 820-827.
  34. KÖSE, M. A., Çetinsağ, N., & Gürcan, K. A. H. R. A. M. A. N. (2017). De novo transcriptome assembly and SSR marker development in apricot (Prunus armeniaca). Turkish Journal of Agriculture and Forestry41(4), 305-315.
  35. Wang, N., Yue, Z. Y., Wang, P., Sun, X., Gong, X. Q., & Ma, F. W. (2017). Function of Malus prunifolia WRKY6 transcription factor in response to different stresses. Biologia plantarum61(2), 284-292.
  36. Rehman, R. N. U., You, Y., Zhang, L., Goudia, B. D., Khan, A. R., Li, P., & Ma, F. (2017). High temperature induced anthocyanin inhibition and active degradation in Malus profusion. Frontiers in plant science8, 1401.
  37. Zhang, Q., Li, Y., Zhang, Y., Wu, C., Wang, S., Hao, L., ... & Li, T. (2017). Md-miR156ab and Md-miR395 target WRKY transcription factors to influence apple resistance to leaf spot disease. Frontiers in plant science8, 526.
  38. Falchi, R., D’Agostin, E., Mattiello, A., Coronica, L., Spinelli, F., Costa, G., & Vizzotto, G. (2017). ABA regulation of calcium-related genes and bitter pit in apple. Postharvest Biology and Technology132, 1-6.
  39. Daccord, N., Celton, J. M., Linsmith, G., Becker, C., Choisne, N., Schijlen, E., ... & Bucher, E. (2017). High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nature genetics49(7), 1099-1106.
  40. Sun, J., Li, L., Wang, P., Zhang, S., & Wu, J. (2017). Genome-wide characterization, evolution, and expression analysis of the leucine-rich repeat receptor-like protein kinase (LRR-RLK) gene family in Rosaceae genomes. BMC genomics18(1), 1-15.
  41. Guo, S., Song, Z., Ma, R., Yang, Y., & Yu, M. (2017). Genome-wide identification and expression analysis of the lipoxygenase gene family during peach fruit ripening under different postharvest treatments. Acta Physiologiae Plantarum39(5), 1-10.
  42. Li, H., Li, R., Qu, F., Yao, J., Hao, Y., Wang, X., & You, C. (2017). Identification of the SRO gene family in apples (Malus× domestica) with a functional characterization of MdRCD1. Tree Genetics & Genomes13(5), 1-14.
  43. Cao, K., Li, H., Wang, Q., Zhao, P., Zhu, G., Fang, W., ... & Wang, L. (2017). Comparative transcriptome analysis of genes involved in the response of resistant and susceptible peach cultivars to nematode infection. Scientia Horticulturae215, 20-27.
  44. Fan, S., Zhang, D., Gao, C., Zhao, M., Wu, H., Li, Y., ... & Han, M. (2017). Identification, classification, and expression analysis of GRAS gene family in Malus domestica. Frontiers in physiology8, 253.
  45. Zhao, S., Yue, C., Luby, J., Gallardo, K., McCracken, V., McFerson, J., & Layne, D. R. (2017). US peach producer preference and willingness to pay for fruit attributes. HortScience52(1), 116-121.
  46. Tenreira, T., Lange, M. J. P., Lange, T., Bres, C., Labadie, M., Monfort, A., ... & Denoyes, B. (2017). A specific gibberellin 20-oxidase dictates the flowering-runnering decision in diploid strawberry. The Plant Cell29(9), 2168-2182.
  47. Liu, Y., Lan, J., Wang, C., Li, B., Zhu, J., Liu, C., & Dai, H. (2017). Investigation and genetic mapping of a Glomerella leaf spot resistance locus in apple. Plant Breeding136(1), 119-125.
  48. Li, H., Zhao, Q., Sun, X., Jia, H., & Ran, K. (2017). Bioinformatic identification and expression analysis of the Malus domestica DREB2 transcription factors in different tissues and abiotic stress. Journal of Plant Biochemistry and Biotechnology26(4), 436-443.
  49. Zhang, C., Chagné, D., Gleave, A., Gardiner, S. E., Bus, V., Sullivan, S., ... & Tian, Y. (2017, March). Fast construction of a reference genome: challenges and opportunities using'Royal Gala'apple as a case study. In IV International Symposium on Molecular Markers in Horticulture 1203 (pp. 35-40).
  50. Zhang, J., Zhang, Y., Dou, Y., Li, W., Wang, S., Shi, W., ... & Zhang, Z. (2017). Single nucleotide mutation in FvMYB10 may lead to the yellow fruit in Fragaria vesca. Molecular breeding37(3), 1-10.
  51. Jiang, Y., Liu, C., Yan, D., Wen, X., Liu, Y., Wang, H., ... & Ren, X. (2017). MdHB1 down-regulation activates anthocyanin biosynthesis in the white-fleshed apple cultivar ‘Granny Smith’. Journal of Experimental Botany68(5), 1055-1069.
  52. Cochavi, S. M., Flaishman, M. A., Faigenboim, A., & Crain, O. (2017, June). Characterization of abscission-related pathways during early apple (Malus× domestica Borkh.) fruitlet development: a marker-assisted horticultural practices approach. In International Symposium on Flowering, Fruit Set and Alternate Bearing 1229 (pp. 65-70).
  53. Prudencio, A. S., Dicenta, F., & Martínez-Gómez, P. (2017, November). Gene expression analysis of flower bud dormancy breaking in almond using RNA-Seq. In VII International Symposium on Almonds and Pistachios 1219 (pp. 119-124).
  54. Kasajima, I., Kikuchi, T., & Yoshikawa, N. (2017). Rapid identification of apple (Malus× domestica Borkh.) S alleles using sequencing-based DNA marker APPLid. Plant Biotechnology, 17-0503.
  55. Norelli, J. L., Wisniewski, M., Fazio, G., Burchard, E., Gutierrez, B., Levin, E., & Droby, S. (2017). Genotyping-by-sequencing markers facilitate the identification of quantitative trait loci controlling resistance to Penicillium expansum in Malus sieversii. PloS one12(3), e0172949.
  56. Härtl, K., Denton, A., Franz-Oberdorf, K., Hoffmann, T., Spornraft, M., Usadel, B., & Schwab, W. (2017). Early metabolic and transcriptional variations in fruit of natural white-fruited Fragaria vesca genotypes. Scientific Reports7(1), 1-16.
  57. Feng, Y., Zhang, X., Wu, T., Xu, X., Han, Z., & Wang, Y. (2017). Methylation effect on IPT5b gene expression determines cytokinin biosynthesis in apple rootstock. Biochemical and biophysical research communications482(4), 604-609.
  58. Lloret, A., Martínez-Fuentes, A., Agustí, M., Badenes, M. L., & Ríos, G. (2017). Chromatin-associated regulation of sorbitol synthesis in flower buds of peach. Plant molecular biology95(4), 507-517.
  59. Sun, T., Li, M., Shao, Y., Yu, L., & Ma, F. (2017). Comprehensive genomic identification and expression analysis of the phosphate transporter (PHT) gene family in apple. Frontiers in plant science8, 426.
  60. van Dijk, A. D. J. (2017). Species-specific genome sequence databases: A practical review. Plant Genomics Databases, 173-181.Li, M., Chen, S., Zhou, R., Fan, Q., Li, F., & Liao, W. (2017). Molecular evidence for natural hybridization between Cotoneaster dielsianus and C. glaucophyllus. Frontiers in plant science8, 704.
  61. Li, M., Chen, S., Zhou, R., Fan, Q., Li, F., & Liao, W. (2017). Molecular evidence for natural hybridization between Cotoneaster dielsianus and C. glaucophyllus. Frontiers in plant science8, 704.
  62. Hernández Mora, J. R., Micheletti, D., Bink, M., Van de Weg, E., Cantín, C., Nazzicari, N., ... & Aranzana, M. J. (2017). Integrated QTL detection for key breeding traits in multiple peach progenies. BMC genomics18(1), 1-15.
  63. Ouellette, S., Goyette, M. H., Labbé, C., Laur, J., Gaudreau, L., Gosselin, A., ... & Bélanger, R. R. (2017). Silicon transporters and effects of silicon amendments in strawberry under high tunnel and field conditions. Frontiers in Plant Science8, 949.
  64. Verde, I., Jenkins, J., Dondini, L., Micali, S., Pagliarani, G., Vendramin, E., ... & Schmutz, J. (2017). The Peach v2. 0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity. BMC genomics18(1), 1-18.
  65. Esmaeili, F., Shiran, B., Fallahi, H., Mirakhorli, N., Budak, H., & Martínez-Gómez, P. (2017). In silico search and biological validation of microRNAs related to drought response in peach and almond. Functional & integrative genomics17(2), 189-201.
  66. Chen, X., Wang, J., Zhao, M., & Yuan, H. (2017). Identification and expression analysis of LATERAL ORGAN BOUNDARIES DOMAIN (LBD) transcription factor genes in Fragaria vesca. Canadian Journal of Plant Science98(2), 288-299.
  67. Han, M., Sun, Q., Zhou, J., Qiu, H., Guo, J., Lu, L., ... & Sun, J. (2017). Insertion of a solo LTR retrotransposon associates with spur mutations in ‘Red Delicious’ apple (Malus× domestica). Plant cell reports36(9), 1375-1385.
  68. Tan, Y., Lv, S., Liu, X., Gao, T., Li, T., Wang, Y., ... & Han, Z. (2017). Development of high-density interspecific genetic maps for the identification of QTLs conferring resistance to Valsa ceratosperma in apple. Euphytica213(1), 1-11.
  69. Li, L., Deng, C. H., Knäbel, M., Chagne, D., Kumar, S., Sun, J., ... & Wu, J. (2017). Integrated high-density consensus genetic map of Pyrus and anchoring of the ‘Bartlett’v1. 0 (Pyrus communis) genome. DNA Research24(3), 289-301.
  70. Fan, S., Zhang, D., Xing, L., Qi, S., Du, L., Wu, H., ... & Han, M. (2017). Phylogenetic analysis of IDD gene family and characterization of its expression in response to flower induction in Malus. Molecular Genetics and Genomics292(4), 755-771.
  71. Delgado, J., & León-Vargas, Y. (2017). Musgos (Bryophyta) de bosques de Polylepis sericea (Rosaceae) del estado Mérida (Venezuela). Boletín de la Sociedad Argentina de Botánica52(2), 295-313.
  72. Bourke, P. M., Arens, P., Voorrips, R. E., Esselink, G. D., Koning‐Boucoiran, C. F., Van't Westende, W. P., ... & Maliepaard, C. (2017). Partial preferential chromosome pairing is genotype dependent in tetraploid rose. The Plant Journal90(2), 330-343.
  73. Mao, K., Dong, Q., Li, C., Liu, C., & Ma, F. (2017). Genome wide identification and characterization of apple bHLH transcription factors and expression analysis in response to drought and salt stress. Frontiers in plant science8, 480.
  74. Shirasawa, K., Isuzugawa, K., Ikenaga, M., Saito, Y., Yamamoto, T., Hirakawa, H., & Isobe, S. (2017). The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding. DNA Research24(5), 499-508.
  75. Chen, M., Liu, X., Huan, L., Sun, M., Liu, L., Chen, X., ... & Li, L. (2017). Genome-wide analysis of Dof family genes and their expression during bud dormancy in peach (Prunus persica). Scientia horticulturae214, 18-26.
  76. Wang, N., Qu, C., Wang, Y., Xu, H., Jiang, S., Fang, H., ... & Chen, X. (2017). MdMYB4 enhances apple callus salt tolerance by increasing MdNHX1 expression levels. Plant Cell, Tissue and Organ Culture (PCTOC)131(2), 283-293.
  77. Serra, O., Giné-Bordonaba, J., Eduardo, I., Bonany, J., Echeverria, G., Larrigaudière, C., & Arús, P. (2017). Genetic analysis of the slow-melting flesh character in peach. Tree Genetics & Genomes13(4), 1-13.
  78. Sandefur, P., Frett, T., Clark, J., Gasic, K., & Peace, C. (2017). A DNA test for routine prediction in breeding of peach blush, Ppe-Rf-SSR. Molecular breeding37(1), 1-15.
  79. Lee, S. J., Ban, S. H., Kim, G. H., Kwon, S. I., Kim, J. H., & Choi, C. (2017). Identification of potential gene‐associated major traits using GBS‐GWAS for Korean apple germplasm collections. Plant Breeding136(6), 977-986.
  80. Krasuska, U., Ciacka, K., & Gniazdowska, A. (2017). Nitric oxide-polyamines cross-talk during dormancy release and germination of apple embryos. Nitric Oxide68, 38-50.
  81. Roman, H., Girault, T., Le Gourrierec, J., & Leduc, N. (2017). In silico analysis of 3 expansin gene promoters reveals 2 hubs controlling light and cytokinins response during bud outgrowth. Plant Signaling & Behavior12(2), 489-509.
  82. Sameeullah, M., Aslam, N., Khan, F. A., & Aasim, M. (2017). Bioinformatics Tools Make Plant Functional Genomics Studies Easy. In Plant Bioinformatics (pp. 135-145). Springer, Cham.
  83. Zheng, X., Zhou, J., Tan, D. X., Wang, N., Wang, L., Shan, D., & Kong, J. (2017). Melatonin improves waterlogging tolerance of Malus baccata (Linn.) Borkh. seedlings by maintaining aerobic respiration, photosynthesis and ROS migration. Frontiers in plant science8, 483.
  84. Cova, V., Paris, R., Toller, C., Patocchi, A., Velasco, R., & Komjanc, M. (2017). Apple genes involved in the response to Venturia inaequalis and salicylic acid treatment. Scientia Horticulturae226, 157-172.
  85. Klein, P. E., van de Weg, W. E., Yang, J., Yan, M., Byrne, D. H., & Cai, L. (2017, July). Black spot partial resistance in diploid roses: QTL discovery and linkage map creation. In VII International Symposium on Rose Research and Cultivation 1232 (pp. 135-142).
  86. Wu, X., Gong, Q., Ni, X., Zhou, Y., & Gao, Z. (2017). UFGT: the key enzyme associated with the petals variegation in Japanese apricot. Frontiers in plant science8, 108.
  87. Baldi, P., Moser, M., Brilli, M., Vrhovsek, U., Pindo, M., & Si-Ammour, A. (2017). Fine-tuning of the flavonoid and monolignol pathways during apple early fruit development. Planta245(5), 1021-1035.
  88. Shin, J., & Lee, I. (2017). Construction of functional gene networks using phylogenetic profiles. In Bioinformatics (pp. 87-98). Humana Press, New York, NY.
  89. Li, H., Yang, Q. S., Liu, W., Lin, J., & Chang, Y. H. (2017). The AMT1 family genes from Malus robusta display differential transcription features and ammonium transport abilities. Molecular biology reports44(5), 379-390.
  90. Bretó, M. P., Cantín, C. M., Iglesias, I., Arús, P., & Eduardo, I. (2017). Mapping a major gene for red skin color suppression (highlighter) in peach. Euphytica213(1), 1-10.
  91. Li, J., Qin, M., Qiao, X., Cheng, Y., Li, X., Zhang, H., & Wu, J. (2017). A new insight into the evolution and functional divergence of SWEET transporters in Chinese white pear (Pyrus bretschneideri). Plant and Cell Physiology58(4), 839-850.
  92. Ayala, M., Gebauer, M., Castro, F., & Zoffoli, J. P. (2017, June). Preliminary results of new sweet cherry (Prunus avium) breeding program in Chile. In VIII International Cherry Symposium 1235 (pp. 295-302).
  93. Wang, K., Yin, X. R., Zhang, B., Grierson, D., Xu, C. J., & Chen, K. S. (2017). Transcriptomic and metabolic analyses provide new insights into chilling injury in peach fruit. Plant, Cell & Environment40(8), 1531-1551.
  94. Brikis, C. J., Zarei, A., Trobacher, C. P., DeEll, J. R., Akama, K., Mullen, R. T., ... & Shelp, B. J. (2017). Ancient plant glyoxylate/succinic semialdehyde reductases: GLYR1s are cytosolic, whereas GLYR2s are localized to both mitochondria and plastids. Frontiers in plant science8, 601.
  95. Saini, S. S., Teotia, D., Gaid, M., Thakur, A., Beerhues, L., & Sircar, D. (2017). Benzaldehyde dehydrogenase-driven phytoalexin biosynthesis in elicitor-treated Pyrus pyrifolia cell cultures. Journal of plant physiology215, 154-162.
  96. Howard, N. P., Van De Weg, E., Bedford, D. S., Peace, C. P., Vanderzande, S., Clark, M. D., ... & Luby, J. J. (2017). Elucidation of the ‘Honeycrisp’pedigree through haplotype analysis with a multi-family integrated SNP linkage map and a large apple (Malus× domestica) pedigree-connected SNP data set. Horticulture Research4.
  97. An, J. P., Liu, X., Li, H. H., You, C. X., Wang, X. F., & Hao, Y. J. (2017). Apple RING E3 ligase MdMIEL1 inhibits anthocyanin accumulation by ubiquitinating and degrading MdMYB1 protein. Plant and Cell Physiology58(11), 1953-1962.
  98. Lui, S., Luo, C., Zhu, L., Sha, R., Qu, S., Cai, B., & Wang, S. (2017). Identification and expression analysis of WRKY transcription factor genes in response to fungal pathogen and hormone treatments in apple (Malus domestica). Journal of Plant Biology60(2), 215-230.
  99. Biscarini, F., Nazzicari, N., Bink, M., Arús, P., Aranzana, M. J., Verde, I., ... & Rossini, L. (2017). Genome-enabled predictions for fruit weight and quality from repeated records in European peach progenies. BMC genomics18(1), 1-15.
  100. Cubells-Baeza, N., Gómez-Casado, C., Tordesillas, L., Ramírez-Castillejo, C., Garrido-Arandia, M., González-Melendi, P., ... & Díaz-Perales, A. (2017). Identification of the ligand of Pru p 3, a peach LTP. Plant molecular biology94(1), 33-44.
  101. Li, Y., Dai, C., Hu, C., Liu, Z., & Kang, C. (2017). Global identification of alternative splicing via comparative analysis of SMRT‐and Illumina‐based RNA‐seq in strawberry. The Plant Journal90(1), 164-176.
  102. Song, C., Zhang, D., Zheng, L., Zhang, J., Zhang, B., Luo, W., ... & Han, M. (2017). miRNA and degradome sequencing reveal miRNA and their target genes that may mediate shoot growth in spur type mutant “Yanfu 6”. Frontiers in Plant Science8, 441.
  103. Zutta, B. R., & Rundel, P. W. (2017). Modeled shifts in Polylepis species ranges in the Andes from the last glacial maximum to the present. Forests8(7), 232.
  104. Hong, J. H., Shim, E. J., & Kwon, Y. S. (2017). Construction of a microsatellite DNA profile database for pear cultivars and germplasm. Horticultural Science & Technology35(1), 98-107.
  105. Yang, J., Zhang, G., Zhang, J., Liu, H., Chen, W., Wang, X., ... & Yang, S. (2017). Hybrid de novo genome assembly of the Chinese herbal fleabane Erigeron breviscapus. Gigascience6(6), gix028.
  106. Pezzotti, M. (2017). Fang Li, Jinjin Li, Ming Qian, Mingyu Han, Lijun Cao, Hangkong Liu, Dong Zhang and Caiping Zhao. Molecular and Metabolic Mechanisms Associated with Fleshy Fruit Quality, 66.
  107. Sun, M., Xu, Y., Huang, J., Jiang, Z., Shu, H., Wang, H., & Zhang, S. (2017). Global identification, classification, and expression analysis of MAPKKK genes: functional characterization of MdRaf5 reveals evolution and drought-responsive profile in apple. Scientific reports7(1), 1-14.
  108. Yuan, H., Zhang, L., Jiang, Z., & Wang, A. (2017). Characterization of ripening-related puarp4 in pear (pyrus ussuriensis). Journal of Plant Growth Regulation36(3), 766-772.
  109. Micheletti, D., Bink, M., Van de Weg, E., Nazzicari, N., Caprera, A., Dettori, M. T., ... & Verde, I. (2017). Integrated QTL detection for key breeding traits in multiple peach progenies. BMC Genomics18(1).
  110. Saito, T., Wang, S., Ohkawa, K., Ohara, H., Ikeura, H., Ogawa, Y., & Kondo, S. (2017). Lipid droplet-associated gene expression and chromatin remodelling in LIPASE 5′-upstream region from beginning-to mid-endodormant bud in ‘Fuji’apple. Plant molecular biology95(4), 441-449.
  111. Vidales, J. A. (2017). Libo Xing†, Dong Zhang†, Xiaomin Song†, Kai Weng, Yawen Shen, Youmei Li, Caiping Zhao, Juanjuan Ma, Na An and Mingyu Han. Advances and Trends in Development of Plant Factories, 129.
  112. Jambagi, S., & Dunwell, J. M. (2017). Identification and expression analysis of Fragaria vesca MLO genes involved in interaction with powdery mildew (Podosphaera aphanis). Journal of Advances in Plant Biology1(1), 40-54.
  113. Singh, V., Weksler, A., & Friedman, H. (2017). Different preclimacteric events in apple cultivars with modified ripening physiology. Frontiers in plant science8, 1502.
  114. Xu, X., Li, X., Hu, X., Wu, T., Wang, Y., Xu, X., ... & Han, Z. (2017). High miR156 expression is required for auxin-induced adventitious root formation via MxSPL26 independent of PINs and ARFs in Malus xiaojinensis. Frontiers in plant science8, 1059.
  115. Barros, P. M., Cherian, S., Costa, M., Sapeta, H., Saibo, N. J. M., & Oliveira, M. M. (2017). The identification of almond GIGANTEA gene and its expression under cold stress, variable photoperiod, and seasonal dormancy. Biologia plantarum61(4), 631-640.
  116. Qi, X., Liu, C., Song, L., Li, Y., & Li, M. (2017). PaCYP78A9, a cytochrome P450, regulates fruit size in sweet cherry (Prunus avium L.). Frontiers in Plant Science8, 2076.
  117. Hu, X., Zhong, Y., Huang, K., Wang, S., Cheng, Q., & Cheng, Z. M. (2017). Differential expression of 12 NBS-encoding genes in two apple cultivars in response to Alternaria alternata f. sp. mali infection. Canadian Journal of Plant Science98(2), 279-287.
  118. Lenz, R. R., & Dai, W. (2017). Mapping X-disease phytoplasma resistance in Prunus virginiana. Frontiers in plant science8, 2057.
  119. Barać, G., Ognjanov, V., Vidaković, D. O., Dorić, D., Ljubojević, M., Dulić, J., ... & Gašić, K. (2017). Genetic diversity and population structure of European ground cherry (Prunus fruticosa Pall.) using SSR markers. Scientia Horticulturae224, 374-383.
  120. Zheng, L., Ma, J., Song, C., An, N., Zhang, D., Zhao, C., ... & Han, M. (2017). Genome-wide identification and expression profiling analysis of brassinolide signal transduction genes regulating apple tree architecture. Acta Physiologiae Plantarum39(8), 1-19.
  121. Weiß, S., Bartsch, M., & Winkelmann, T. (2017). Transcriptomic analysis of molecular responses in Malus domestica ‘M26’roots affected by apple replant disease. Plant molecular biology94(3), 303-318.
  122. Mu, Q. I., Huang, Z., Chakrabarti, M., Illa-Berenguer, E., Liu, X., Wang, Y., ... & van der Knaap, E. (2017). Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits. PLoS genetics13(8), e1006930.
  123. Zhao, Y., Dong, W., Wang, K., Zhang, B., Allan, A. C., Lin-Wang, K., ... & Xu, C. (2017). Differential sensitivity of fruit pigmentation to ultraviolet light between two peach cultivars. Frontiers in plant science8, 1552.
  124. Paris, R., Pagliarani, G., Savazzini, F., Aloisi, I., Iorio, R. A., Tartarini, S., ... & Del Duca, S. (2017). Comparative analysis of allergen genes and pro-inflammatory factors in pollen and fruit of apple varieties. Plant Science264, 57-68.
  125. Li, T., Xu, Y., Zhang, L., Ji, Y., Tan, D., Yuan, H., & Wang, A. (2017). The jasmonate-activated transcription factor MdMYC2 regulates ETHYLENE RESPONSE FACTOR and ethylene biosynthetic genes to promote ethylene biosynthesis during apple fruit ripening. The Plant Cell29(6), 1316-1334.
  126. Tan, Y., Shen, F., Chen, R., Wang, Y., Wu, T., Li, T., ... & Zhang, X. (2017). Candidate genes associated with resistance to Valsa canker identified via quantitative trait loci in apple. Journal of Phytopathology165(11-12), 848-857.
  127. Wu, X., Mason, A. M., Yu, M., Ma, R., & Yu, Z. (2017). Quantitative proteomic analysis of pre-and post-harvest peach fruit ripening based on iTRAQ technique. Acta Physiologiae Plantarum39(8), 1-13.
  128. Guo, X., Ma, Z., Zhang, Z., Cheng, L., Zhang, X., & Li, T. (2017). Small RNA-sequencing links physiological changes and RdDM process to vegetative-to-floral transition in apple. Frontiers in plant science8, 873.
  129. Wei, W., Chai, Z., Xie, Y., Gao, K., Cui, M., Jiang, Y., & Feng, J. (2017). Bioinformatics identification and transcript profile analysis of the mitogen-activated protein kinase gene family in the diploid woodland strawberry Fragaria vesca. PLoS One12(5), e0178596.
  130. Klumb, E. K., Arge, L. W. P., do Amaral, M. N., Rickes, L. N., Benitez, L. C., Braga, E. J. B., & Bianchi, V. J. (2017). Transcriptome profiling of Prunus persica plants under flooding. Trees31(4), 1127-1135.
  131. Cooper, D., Bankston, S., Bracke, M. S., Callahan, B., Chang, H., Delserone, L. M., & Diekmann, F. (2017). Supporting the changing research practices of agriculture scholars. Ithaka S+ R, 1-35.
  132. Härtl, K., Kalinowski, G., Hoffmann, T., Preuss, A., & Schwab, W. (2017). RNAi‐mediated endogene silencing in strawberry fruit: detection of primary and secondary siRNAs by deep sequencing. Plant biotechnology journal15(5), 658-668.
  133. Storch, T. T., Finatto, T., Bruneau, M., Orsel-Baldwin, M., Renou, J. P., Rombaldi, C. V., ... & Girardi, C. L. (2017). Contrasting transcriptional programs control postharvest development of apples (Malus x domestica Borkh.) submitted to cold storage and ethylene blockage. Journal of agricultural and food chemistry65(35), 7813-7826.
  134. Estrada-Johnson, E., Csukasi, F., Pizarro, C. M., Vallarino, J. G., Kiryakova, Y., Vioque, A., ... & Valpuesta, V. (2017). Transcriptomic analysis in strawberry fruits reveals active auxin biosynthesis and signaling in the ripe receptacle. Frontiers in Plant Science8, 889.
  135. Zarei, A., Brikis, C. J., Bajwa, V. S., Chiu, G. Z., Simpson, J. P., DeEll, J. R., ... & Shelp, B. J. (2017). Plant glyoxylate/succinic semialdehyde reductases: comparative biochemical properties, function during chilling stress, and subcellular localization. Frontiers in plant science8, 1399.
  136. Duan, N., Bai, Y., Sun, H., Wang, N., Ma, Y., Li, M., ... & Chen, X. (2017). Genome re-sequencing reveals the history of apple and supports a two-stage model for fruit enlargement. Nature Communications8(1), 1-11.
  137. Li, Y., Zhang, D., Zhang, L., Zuo, X., Fan, S., Zhang, X., ... & Han, M. (2017). Identification and expression analysis of cytokinin response-regulator genes during floral induction in apple (Malus domestica Borkh). Plant Growth Regulation83(3), 455-464.
  138. Liu, L., Luo, X. C., Ge, H. J., Guo, C., Sha, G. L., Jiang, Z. S., ... & Shu, H. R. (2017). Apple, from omics to systemic function. Plant Growth Regulation83(1), 1-11.
  139. Wei, N., Govindarajulu, R., Tennessen, J. A., Liston, A., Ashman, T. L., & Sayres, M. W. (2017). Genetic mapping and phylogenetic analysis reveal intraspecific variation in sex chromosomes of the Virginian strawberry. Journal of Heredity108(7), 731-739.
  140. Urrestarazu, J., Muranty, H., Denancé, C., Leforestier, D., Ravon, E., Guyader, A., ... & Durel, C. E. (2017). Genome-wide association mapping of flowering and ripening periods in apple. Frontiers in plant science8, 1923.
  141. Cui, H., & Wang, A. (2017). An efficient viral vector for functional genomic studies of Prunus fruit trees and its induced resistance to Plum pox virus via silencing of a host factor gene. Plant biotechnology journal15(3), 344-356.
  142. Samad, S., Kurokura, T., Koskela, E., Toivainen, T., Patel, V., Mouhu, K., ... & Hytönen, T. (2017). Additive QTLs on three chromosomes control flowering time in woodland strawberry (Fragaria vesca L.). Horticulture research4.
  143. Lv, D., & Zhang, Y. (2017). Isolation and functional analysis of apple MdHMGR1 and MdHMGR4 gene promoters in transgenic Arabidopsis thaliana. Plant Cell, Tissue and Organ Culture (PCTOC)129(1), 133-143.
  144. İpek, A., İpek, M., Ercişli, S., & Tangu, N. A. (2017). Transcriptome-based SNP discovery by GBS and the construction of a genetic map for olive. Functional & integrative genomics17(5), 493-501.
  145. Yang, Y., & Davis, T. M. (2017). A new perspective on polyploid Fragaria (strawberry) genome composition based on large-scale, multi-locus phylogenetic analysis. Genome biology and evolution9(12), 3433-3448.
  146. Kasajima, I., Ito, M., Yamagishi, N., & Yoshikawa, N. (2017). Apple latent spherical virus (ALSV) vector as a tool for reverse genetic studies and non-transgenic breeding of a variety of crops. In Plant epigenetics (pp. 513-536). Springer, Cham.
  147. Marchese, A., Giovannini, D., Leone, A., Mafrica, R., Palasciano, M., Cantini, C., ... & Marra, F. P. (2017). S-genotype identification, genetic diversity and structure analysis of Italian sweet cherry germplasm. Tree Genetics & Genomes13(5), 1-20.
  148. Fan, S., Zhang, D., Zhang, L., Gao, C., Xin, M., Tahir, M. M., ... & Han, M. (2017). Comprehensive analysis of GASA family members in the Malus domestica genome: identification, characterization, and their expressions in response to apple flower induction. BMC genomics18(1), 1-19.
  149. Weiß, S., & Winkelmann, T. (2017). Transcriptome profiling in leaves representing aboveground parts of apple replant disease affected Malus domestica ‘M26’plants. Scientia Horticulturae222, 111-125.
  150. Zhang, M., Lv, Y., Wang, Y., Rose, J. K., Shen, F., Han, Z., ... & Han, Z. (2017). TATA box insertion provides a selection mechanism underpinning adaptations to Fe deficiency. Plant Physiology173(1), 715-727.
  151. Legay, S., Cocco, E., André, C. M., Guignard, C., Hausman, J. F., & Guerriero, G. (2017). Differential lipid composition and gene expression in the semi-russeted “Cox Orange Pippin” apple variety. Frontiers in Plant Science8, 1656.
  152. Liu, Y., Lan, J., Li, Q., Zhang, Y., Wang, C., & Dai, H. (2017). Rapid location of Glomerella leaf spot resistance gene locus in apple by whole genome re-sequencing. Molecular Breeding37(8), 1-10.
  153. Yue, J., Zhang, D., Ban, R., Ma, X., Chen, D., Li, G., ... & Liu, Y. (2017). PCPPI: a comprehensive database for the prediction of Penicillium–crop protein–protein interactions. Database2017.
  154. Gong, X., Shi, S., Dou, F., Song, Y., & Ma, F. (2017). Exogenous melatonin alleviates alkaline stress in Malus hupehensis Rehd. by regulating the biosynthesis of polyamines. Molecules22(9), 1542.
  155. Geuna, F. (2017). Molecular-assisted breeding. More Food: Road to Survial. Sharjah: Bentham Science Publishers, 373-398.
  156. Hanke, M. V., & Flachowsky, H. (2017). Pfirsich (Prunus persica) und Aprikose (Prunus armeniaca). In Obstzüchtung und wissenschaftliche Grundlagen (pp. 303-324). Springer Spektrum, Berlin, Heidelberg.
  157. Yu, X., Hou, Y., Chen, W., Wang, S., Wang, P., & Qu, S. (2017). Malus hupehensis miR168 targets to ARGONAUTE1 and contributes to the resistance against Botryosphaeria dothidea infection by altering defense responses. Plant and Cell Physiology58(9), 1541-1557.
  158. Gor, M. C., Candappa, C., de Silva, T., Mantri, N., & Pang, E. (2017). Identification and validation of FaP1D7, a putative marker associated with the biosynthesis of methyl butanoate in cultivated strawberry (Fragaria x ananassa). Scientific reports7(1), 1-13.
  159. Kurokura, T., Samad, S., Koskela, E., Mouhu, K., & Hytönen, T. (2017). Fragaria vesca CONSTANS controls photoperiodic flowering and vegetative development. Journal of experimental botany68(17), 4839-4850.
  160. Orcheski, B., & Brown, S. (2017). High-throughput sequencing reveals that pale green lethal disorder in apple (Malus) stimulates stress responses and affects senescence. Tree Genetics & Genomes13(1), 1-13.
  161. Hanke, M. V., & Flachowsky, H. (2017). Erdbeere (Fragaria ananassa). In Obstzüchtung und wissenschaftliche Grundlagen (pp. 325-351). Springer Spektrum, Berlin, Heidelberg.
  162. Foster, T. M., McAtee, P. A., Waite, C. N., Boldingh, H. L., & McGhie, T. K. (2017). Apple dwarfing rootstocks exhibit an imbalance in carbohydrate allocation and reduced cell growth and metabolism. Horticulture research4.
  163. Hanke, M. V., & Flachowsky, H. (2017). Himbeere und Brombeere (Rubus spp.). In Obstzüchtung und wissenschaftliche Grundlagen (pp. 353-384). Springer Spektrum, Berlin, Heidelberg.
  164. de Aragón, A. (2017). 6 Molecular Breeding and Genomics. Almonds: Botany, Production and Uses, 149.
  165. Qi-Jun Ma, Mei-Hong Sun, Jing Lu, Ya-Jing Liu, Da-Gang Hu, Yu-Jin Hao, Transcription Factor AREB2 Is Involved in Soluble Sugar Accumulation by Activating Sugar Transporter and Amylase Genes, Plant Physiology, Volume 174, Issue 4, August 2017, Pages 2348–2362, https://doi.org/10.1104/pp.17.00502
  166. Wang, Y., Zhang, X., Wang, R., Bai, Y., Liu, C., Yuan, Y., ... & Yang, S. (2017). Differential gene expression analysis of ‘Chili’(Pyrus bretschneideri) fruit pericarp with two types of bagging treatments. Horticulture research4.
  167. Urrutia, M., Rambla, J. L., Alexiou, K. G., Granell, A., & Monfort, A. (2017). Genetic analysis of the wild strawberry (Fragaria vesca) volatile composition. Plant Physiology and Biochemistry121, 99-117.
  168. Cirilli, M., Delfino, I., Caboni, E., & Muleo, R. (2017). EpiHRMAssay, in tube and in silico combined approach for the scanning and epityping of heterogeneous DNA methylation. Biology Methods and Protocols2(1), bpw008.
  169. Urrestarazu Vidart, J., Muranty, H., Denancé, C., Leforestier, D., Ravon, E., Guyader, A., ... & Durel, C. E. (2017). Genome-wide association mapping of flowering and ripening periods in apple. Frontiers in Plant Science, 8: 1923.
  170. Hanke, M. V., & Flachowsky, H. (2017). Süßkirsche (Prunus avium) und Sauerkirsche (Prunus cerasus). In Obstzüchtung und wissenschaftliche Grundlagen (pp. 247-280). Springer Spektrum, Berlin, Heidelberg.
  171. Hanke, M. V., & Flachowsky, H. (2017). Birne (Pyrus communis). In Obstzüchtung und wissenschaftliche Grundlagen (pp. 211-240). Springer Spektrum, Berlin, Heidelberg.