MDC007482.376, MDC007482.376 (contig) Malus x domestica

Overview
NameMDC007482.376
Unique NameMDC007482.376
Typecontig
OrganismMalus x domestica (Apple)
Sequence length6649
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
Alignments
Feature NameTypeLocationAnalysis
RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1 genetic_marker RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1:784..784. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CA_23552014_Lg13 genetic_marker RosBREEDSNP_SNP_CA_23552014_Lg13:6243..6243. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GT_37571023_Lg3 genetic_marker RosBREEDSNP_SNP_GT_37571023_Lg3:4972..4972. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37571045_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37571045_Lg3:4950..4950. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37571077_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37571077_Lg3:4918..4918. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AC_37571085_Lg3 genetic_marker RosBREEDSNP_SNP_AC_37571085_Lg3:4910..4910. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AC_37571366_Lg3 genetic_marker RosBREEDSNP_SNP_AC_37571366_Lg3:4629..4629. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TG_37571502_Lg3 genetic_marker RosBREEDSNP_SNP_TG_37571502_Lg3:4493..4493. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37571866_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37571866_Lg3:4129..4129. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37571927_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37571927_Lg3:4068..4068. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_37571929_Lg3 genetic_marker RosBREEDSNP_SNP_TC_37571929_Lg3:4066..4066. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37571999_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37571999_Lg3:3996..3996. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_37572123_Lg3 genetic_marker RosBREEDSNP_SNP_TC_37572123_Lg3:3872..3872. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37572172_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37572172_Lg3:3823..3823. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_37572241_Lg3 genetic_marker RosBREEDSNP_SNP_CT_37572241_Lg3:3754..3754. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37572288_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37572288_Lg3:3707..3707. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37572604_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37572604_Lg3:3391..3391. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TG_37572613_Lg3 genetic_marker RosBREEDSNP_SNP_TG_37572613_Lg3:3382..3382. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37572614_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37572614_Lg3:3381..3381. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37572620_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37572620_Lg3:3375..3375. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_37572695_Lg3 genetic_marker RosBREEDSNP_SNP_TC_37572695_Lg3:3300..3300. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_37572712_Lg3 genetic_marker RosBREEDSNP_SNP_TC_37572712_Lg3:3283..3283. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_37572764_Lg3 genetic_marker RosBREEDSNP_SNP_CT_37572764_Lg3:3231..3231. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_37572765_Lg3 genetic_marker RosBREEDSNP_SNP_CT_37572765_Lg3:3230..3230. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37572799_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37572799_Lg3:3196..3196. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37572869_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37572869_Lg3:3126..3126. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37572872_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37572872_Lg3:3123..3123. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AC_37572949_Lg3 genetic_marker RosBREEDSNP_SNP_AC_37572949_Lg3:3046..3046. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37574606_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37574606_Lg3:1389..1389. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AC_37574698_Lg3 genetic_marker RosBREEDSNP_SNP_AC_37574698_Lg3:1297..1297. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_37574815_Lg3 genetic_marker RosBREEDSNP_SNP_TC_37574815_Lg3:1180..1180. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_37575211_Lg3 genetic_marker RosBREEDSNP_SNP_GA_37575211_Lg3:784..784. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_37575661_Lg3 genetic_marker RosBREEDSNP_SNP_AG_37575661_Lg3:334..334. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_37575703_Lg3 genetic_marker RosBREEDSNP_SNP_CT_37575703_Lg3:292..292. Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr3 chromosome chr3:32051557..32058205- Malus x domestica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

contig sequence

>MDC007482.376 ID=MDC007482.376; Name=MDC007482.376; organism=Malus x domestica; type=contig; length=6649bp
GTAACATCATTTGTAAAAACCTGTAATTCAGAACATAAATCGGCTTCATC
TACATCCATGGTATTTCCATGTTTCAAATGTGTTTTCAGATTCATACAAT
TTTCTTTTAGCTCTTGATCATCTAATGAAATTAACTTTGGTGCATCAAAC
AAGAAGCCAAAAATAGATTCAAAAGTCTTTAACTGTTCAAACTTGTGATT
CATATAATTCTATGTCACTTGTAAAATTTTATATTAAATTATGAATTAAT
AATTCAAATTTTAAAACTTAGTTTACCTCAAAACTCAAAAGGGTTGGTGA
ATGCACTGAATGAGAAGGACATGTCGGGCTTGCTGGCTTGGAAGCTGTAG
CGCAACAACTTGCAGTGAGTTTTGAGGGTTAAATTGCTGCACTTGTAGCC
TATGGATGGGAGAAACTAACAGAGATGACATGCAGTGTAGTAGGGTAAGT
GGGAAACAAGGTCAGGGCAGGGGATCGGGAAAAAGGAGGATATGTTTGGA
ATTTAGGGTTAATTGGGGACAAGTGGTCCCTCTTATGTTTTTTTTTAATG
ACCCAAAACCTGGGCCTTTCAACTTTTTTGTCAAACTTGGGCTCTTGCCC
TCCAACCCCTATTTTTGGCTCTAGCCTTTTTYYTTTTTTTTAAWTACCTA
GTTATGTGGATTTTTWWTTTTTTGGTGCCTTTTCAATTTTGGCCCCAGAC
CAGTGCCCTGGTAGCACTGGGCATGGGCTGGGCCTGGGCTGAGCCTGGTG
GGAGGAAGACAGATGAACCCTCTGGTGCTTGCTCATGAGCTTGTTCGCTT
TGAAAACCTTCTCGTCGCACGCTCAGAAGAGAGCTGCCTCGTCGGCGCAT
CAAAGGACGTTCGCCTTCCCTACCTCGCAGACGTTGCATTGTATCTTTAT
CTCTTTCTAAACCCTTCCAAAATCTCTGCTTTTGTGAGTTATGTTGGTGT
CTATCTCTCTACAGTTGAAGGATAAGGAGCAAGCTTGGCCCAGGCCCAGG
CCCAATGTTGGTAGGGCGATCGTCCGGGGCCCAAAATAATTAGTGGCACC
AAAATTATTAGGGTGGTATATTTATATATGTTTTCATAAAAGTATAAATT
TATAAATTTTGGTTCATTGACAAAGAAATTTATCTAGAACTGGTGGTTTT
GTTGTTTGAAATTAATGAGGAGGTCTTGAATTCAAAACACCATGTGTGCT
TATTTACCTTTCAATTTTTACAAATTTCTTTTCATAAGAGTATAAATATA
TCAAATTTGGCTGAATAATCAAGAAGTTTAATTAGAATCAATGGTTTTTG
TTGTTTAAAATTAAAGAGAGATCTTAAGTTTGAAATGCTAAGTGCATGTT
TATTCTTTTCAATTTTTACAAATTTTTGTTTGGTTAATCTATTTTTAATT
AGTAGCTAGTAGCTATTTGGGTTGTTATTTTTAAACAGTTGTTCCAATTC
AAGTCTAATATTCAACAAAGAATAATACGTTGACCAAATTTTTAGACCAA
ATTTGCAAATCATATGACATATCATCAAAAAGTTTAATTTAGTACCCATT
TATTACTTATACATATCAATGAAAACTCAAAAACATCATTATTTTTTTAA
TCCCATATTGACAAGGTTAGTATGTAACATCCCACATCGTCCAGGGGAGT
GATCCTTAAATGTATATTCTCATCCATACCTGGCACGAGGCCTTTTGGGA
GCTCACTGGCTTCGAGTTTCGTAGGAACTCCGAAGTTAAGCGAGAATGAG
GCCAGAGCATTCCCAAGATGGGTGACCCACTGGGAAGTTGCTCGTGAGTT
CCCAAAAAAAACTGTGAGGGAATAGGTAAAGGCCCAAAAGGTGGAACCGA
AACTAAGTACCAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTCGGGTTTCGGAACTCTAAAGTTAAGCGAGAATGAGGCCAGAGCAT
TCCCAAGATGGGTGACCCACTGGGAAGTTGCTCGTGAGTTCCCAAAAACA
AAACTGTGAGGGAATGGTAAGCCCAAAGTGGACAATATCATGCTACGGTG
GTGGAACGGGTCCCAGATGCGGTTGACCCAGGCATGTATATTCTCATCCC
TACCTAGCACGAGGCCTTTTGGGAGCTCACTGGCTTCGGGTTTCGGAACT
CTAAAGTTAAGCGMTACGRKGSYAGARCRSTCCMGRKMWGGATGACCYWY
TGGGAAGTWGCTTGTGAGTTTCCYAARAACRAARCCGTKAAGGAATGSTA
AGCCCARAGCGGACAATATCGTGCYACGRTGGTGAAACGGGCCCGGGATG
TGGTGGACTCAGGTCGGAATGTGACAAATGGTATCAGAGCMAATCCCTGG
CCGGAAGTGTGTCGACGAGGATRTTRKGCYMCTAAGGKGGGTGGAYTGYA
ACATCTCASATCACCCAGGSGAGTGATCCTTAAATGTATATTCTCATCCC
TACCTAGCACRAGGMYTTTTGGGAGCTCACTGGCTTCGGGTTCTATMGGA
AYTCYRAAGTTAAGCGAGAAARAGGYCAGAGCACTYCCAGGATRGGTGAC
CCACTGGGAAGTGCTCRTGAGTTCCYAAAAACAAAACCGTGAGGGAATGG
TAAGCCCAAARCGGACAATATCGTGCTACGGTRGTGGAACGGGGCCGGGA
TGTGGTGRACTCAGGCCRGGATGTGACATAGYRAATAAGAAAAAACACCT
CACGATTTATACMARAACWCTTTAAAAGTTCAGMKRGAAMRARRMMARAY
CTCATATCTATCTACTKGKAAACCTTGAGTTTTTTTTGTTTCCTTCTCAT
GATACAAAATAAATTAGTTTTTCCGTGTTTCTAAATTATTAAGTTTGAAG
TTATTTTAAGTATAATTTTATTGATGTTTTACGTGTGAAAACAAATAATT
TTTTTTTWTATACAGTGAGGGCACATTTTTTGACATCATTCCTGGCCTCA
TAAATCTCTAGACCAGCCCTGATGGGGAGCGAGAGTAAAAAATGATGGAC
TTTTTATGAGGACAGCGAGCAATTTCAAGGTGACACGTGGAGGGTTTTAA
CAAGTGTCGTGGCTTAGGAGGCTGCCGTTGCTTTGCAACTGTAAATTGGA
CGATATTTTTGTTTACAAATATCTTTGGGAAATTAACTGACACTGTGTTC
CGACAAACAAAAATTGACAACTTCATTCGGGTCGGGTTTTGATTGGCTCT
TATCTATTGGGTTTAAAAGTTGAATTAGCAAAACGGGTTTGGACAAGTCA
GTTGTAATTTGGATGAATTAGCGAATTCTATTCCAACATGTTATTTTAAA
GTGATGTGAGTGTGGCCAAATTGATTAGAACAAATGTGTTCCCTTTATAC
ATCAACTGAAAATACTACGGAGATCGTTTTTTTATAACACAAGGTGTTCT
TTTTATACTTTTTTTTAGTAGTGTTAGTTCAAGTTGGAATGAATTAAMAA
TCATAACAARCTCGTGTATAGTTATTGATTACTTTTTCAATTATCCTCAC
ACTAAATTTTAAACGGTTTGTTTTCGAGTTTAGGTAACTTGTCCCACTAC
ATAAACACGAGGGATTTTTCAGTGTGACTGTCATACGAGGTGATACACCA
CGTGTCTCCATATAAATGGTGTGTGTGTTAAAAGGTTAATAACTTAAAAA
TTAAAATTTTCCACCATTTACACACAAACACGTGATATATCATCCGTGTT
CCCGTCACAACTAAAAATTTCTCCATAAAACCACCTGAATCCACAAAACG
ACGGCCTAGTTTAGAATGGACATCGACCGGCGCAAGTAGGCAACATATGG
AGGGTACCCAAATTAATGAGAAGGCTCACTCAAGGACTGGCATTGTTTGG
TATGGGATGGTAGACCTTTCTTGTTGAGGTTTTGAACTTAAATGAGATGA
GATGTAGGAACCAGTGGCGAAGCCACGGAGGTGCGGCCGCCCCTCTGGTC
GCCGGAATTCATGCCTAAGATCCAGATTTCTGCCCCTCTGCTAGCAGTTG
CCGCTCTGCTTTGCCAGCGATAGTTTTGGTACTCTGCGCGGCGCCGCTAC
GTTTCTGCTTTTTTGTTTAAATCCCAGGCAAATGGCGTAGTTGTGGAAAG
GTAGAATTAAGTGAAACAGTGCGTAGACAGCCAAAGTAAAAGGGATCGTT
TTCAAGGATGGGGTGCAGTGGCACTAGAGCCAAGAAAACTCCCATCTCAT
CCAAGGTTCRAATCCCCYWMCCCCAAATTTAACCAATGACAAAAAAAAAA
AARAAAAAACAAACAGACAGGGASCARGGGACCACACTTGTCCCCCACCC
CCAATTATGTTAAAACTTAAATGGTTGGTGTTTGATTTTCTTTGTTTGTC
CAAAAAAAAAATAGTGATTCATTTTCTTTATCTTGACCGTCCATTTCGTT
TGGCAAACCCACCACTTTCATTTAAATCATGTTATTTTGTACAACACTGC
AAGACCCGTCTAGGTTCCACAATTTTTAATTAATCAAAGTATAATTACAA
CTTTTAATTATATTAACAAGGAATAAAAATAGTGAAATTTTAACTTTTCG
TGTTAGTATAATACATGTGGCATGAGTATAAGCGAGAAGGTTGAAATAAA
AGACTAATGTCACATGTATTCCAACAACACAAAATCTAAAAATTTAACTA
TATTGAAATCCCACTATTTTTGTTCCTTGTCGATATAATTAAAAGTTATA
ATTAAAGTGTGATTACTTATGTTTTGGTGATCTATTTGTTCAGAGTTTTC
CTAGCTAAGTTTGTAAATCCGATTAACAGGAGATATATCACTCGTCAAAG
AAAATGATGAAATGAGATATTAATGGTTGACTGATAACATGATTGTTTAC
ATTGAGAGATATGTCTTTTTCTTTTTTTATTGATAATGAGCCTATTATGT
GATATTTTTATGACATGAAACCTCGTAGACAACAACTGTAACTTGTTTGT
ATTGATAAATTAAGAATGACATTAATGTTAATGACTATCTAAAAGAATTT
GGTTATCTACAGTTTCCTGGGACTTTTACCCTTTTAAATATCGCCCCTCC
CCTAAACAATTTCTGACTTCGCCACTGAGTGGGAAGCCTTTGGAATGCAA
GTTTTGTGATCTTCAATTGGTTGATTTGAAGATATTGCCTAGAAATGCAG
CTGATGATGCTTTCCTTTCCTTAGAATGTTGGAATATGAGTATGAAACAT
GTTTGAGGATTAGCTATAATATTGGATGAATTCTTGAATGGAAAAAGTCT
TGATAAGGTGTTTKGTWGRATTTTTTTATGAGTGCTTTTAGTGTACCTCT
GGAAAAGGTTTCGGATCCTACACTAATTGATCTTGTACACTCATTGTGTG
AAAAGGTTTTGTTTTAGAGTTCAACACTAATTCTAATAGGTGAATGAGTT
GGATTAATGTTGTATATAACCTCAATCACTGCTCTTGCAAAGACACGGCT
CATCTTGTATTGAATACCTATTATTCAGAGAGTTTTTTCTAGTTTTGCTA
AAGAGGAGAAGATTGCTTGGTTGTGAAGCTGCTATGGCTTCTTCGAGTTC
AAGTTCTGCAGGTATGTTTTCCACTGGTTTCATATTCGTGTTTATAGTTT
TGTCACTTAGTTCGATTGTTGGAGTATTGGTAACTTACTGGCATATCTTT
GATCTGTGATATAGTTCTTACATAGAAATCCTAAATTCATAAACAAAAGG
TGGTAAACTGAAAGAATTATTCTGGGGGAATTTTGGCAAAGGCGTGAGAA
AGTTCCAGGTTAAGGCTTTGCAAAAAGTACAATGAGTTTCTGAAATTCAA
GGGGCACTTATCTGATCCTCTCCTTGTATGTGATGTTTTGGGAAAACCTG
GTGAAGATGGAAAAGAACGTTCTGGCAATTATTATGCAGATAAGGTTCTA
GAAATGCTAGCAGCGGACTTGGGAGAGAATGCGAAGAGAAAATCAGCGCC
CATTTGGCAGATTCTCTTGAGTTTCTTATATAGGAATGGTCAAGGAGCAT
TAGTGTCTCTTTCAAGTCACAGTGGTGTATCGTCTACCGGAATTCTCAAA
CCTTTCACAGTTTCTTCGGCTCTGCTGTTTATTGTGGATGAAGGATTTCA
CCCTCAGACAAAAGTGCATGATATTGGTGGAGCAAAAGCAGGCCAATTAA
GTCGAAATATGAAGAATGGGATTTGCGAGCCGAATGCTGATCGGGACCAT
ACTGGGCCATCCAATAAGCATTCTGCAGGGAAGGAGGGAAGCAAGAGAAA
TAACAAAAGAAATTCACAGTTGCTACAAGATCTCACATGGAGTGCCTTCT
GCAAGGCAGCATTTGAACACTCAGAGATAGGTTTGGAAGAGGTTTACTTT
GCCAGGGAATGTTATAACTAAAAAAAGATRCGATTTCTGAAATGCTGGAT
GAAACAGATTAAGAAGTCTAGYGATCGTGGTCTAATAGTGGAGAAAGAAT
CCCAGGCAGACCAGCTCAATAAGAAAAGGGATGGGCAATAGGTTGGATAA
CTTGCACCATGAAAGTGACAGCCAATTTCTTCATCTCCTTCCATTGGAGA
AAATTCNTTGACTGTGGCTTCTGGCATACAAGATGAAGCTGCTTTGGAA
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