MDC007482.376, MDC007482.376 (contig) Malus x domestica

Overview
NameMDC007482.376
Unique NameMDC007482.376
Typecontig
OrganismMalus x domestica (Apple)
Sequence length6649
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1genetic_markerRosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1:784..784 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CA_23552014_Lg13genetic_markerRosBREEDSNP_SNP_CA_23552014_Lg13:6243..6243 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GT_37571023_Lg3genetic_markerRosBREEDSNP_SNP_GT_37571023_Lg3:4972..4972 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37571045_Lg3genetic_markerRosBREEDSNP_SNP_AG_37571045_Lg3:4950..4950 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37571077_Lg3genetic_markerRosBREEDSNP_SNP_AG_37571077_Lg3:4918..4918 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_37571085_Lg3genetic_markerRosBREEDSNP_SNP_AC_37571085_Lg3:4910..4910 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_37571366_Lg3genetic_markerRosBREEDSNP_SNP_AC_37571366_Lg3:4629..4629 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TG_37571502_Lg3genetic_markerRosBREEDSNP_SNP_TG_37571502_Lg3:4493..4493 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37571866_Lg3genetic_markerRosBREEDSNP_SNP_GA_37571866_Lg3:4129..4129 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37571927_Lg3genetic_markerRosBREEDSNP_SNP_GA_37571927_Lg3:4068..4068 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TC_37571929_Lg3genetic_markerRosBREEDSNP_SNP_TC_37571929_Lg3:4066..4066 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37571999_Lg3genetic_markerRosBREEDSNP_SNP_AG_37571999_Lg3:3996..3996 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TC_37572123_Lg3genetic_markerRosBREEDSNP_SNP_TC_37572123_Lg3:3872..3872 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37572172_Lg3genetic_markerRosBREEDSNP_SNP_AG_37572172_Lg3:3823..3823 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_37572241_Lg3genetic_markerRosBREEDSNP_SNP_CT_37572241_Lg3:3754..3754 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37572288_Lg3genetic_markerRosBREEDSNP_SNP_AG_37572288_Lg3:3707..3707 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37572604_Lg3genetic_markerRosBREEDSNP_SNP_GA_37572604_Lg3:3391..3391 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TG_37572613_Lg3genetic_markerRosBREEDSNP_SNP_TG_37572613_Lg3:3382..3382 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37572614_Lg3genetic_markerRosBREEDSNP_SNP_GA_37572614_Lg3:3381..3381 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37572620_Lg3genetic_markerRosBREEDSNP_SNP_AG_37572620_Lg3:3375..3375 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TC_37572695_Lg3genetic_markerRosBREEDSNP_SNP_TC_37572695_Lg3:3300..3300 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TC_37572712_Lg3genetic_markerRosBREEDSNP_SNP_TC_37572712_Lg3:3283..3283 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_37572764_Lg3genetic_markerRosBREEDSNP_SNP_CT_37572764_Lg3:3231..3231 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_37572765_Lg3genetic_markerRosBREEDSNP_SNP_CT_37572765_Lg3:3230..3230 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37572799_Lg3genetic_markerRosBREEDSNP_SNP_AG_37572799_Lg3:3196..3196 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37572869_Lg3genetic_markerRosBREEDSNP_SNP_GA_37572869_Lg3:3126..3126 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37572872_Lg3genetic_markerRosBREEDSNP_SNP_AG_37572872_Lg3:3123..3123 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_37572949_Lg3genetic_markerRosBREEDSNP_SNP_AC_37572949_Lg3:3046..3046 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37574606_Lg3genetic_markerRosBREEDSNP_SNP_GA_37574606_Lg3:1389..1389 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_37574698_Lg3genetic_markerRosBREEDSNP_SNP_AC_37574698_Lg3:1297..1297 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TC_37574815_Lg3genetic_markerRosBREEDSNP_SNP_TC_37574815_Lg3:1180..1180 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GA_37575211_Lg3genetic_markerRosBREEDSNP_SNP_GA_37575211_Lg3:784..784 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_37575661_Lg3genetic_markerRosBREEDSNP_SNP_AG_37575661_Lg3:334..334 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_37575703_Lg3genetic_markerRosBREEDSNP_SNP_CT_37575703_Lg3:292..292 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
chr3chromosomechr3:32051557..32058205 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
Sequences
The following sequences are available for this feature:

contig sequence

>MDC007482.376 ID=MDC007482.376; Name=MDC007482.376; organism=Malus x domestica; type=contig; length=6649bp
GTAACATCATTTGTAAAAACCTGTAATTCAGAACATAAATCGGCTTCATC
TACATCCATGGTATTTCCATGTTTCAAATGTGTTTTCAGATTCATACAAT
TTTCTTTTAGCTCTTGATCATCTAATGAAATTAACTTTGGTGCATCAAAC
AAGAAGCCAAAAATAGATTCAAAAGTCTTTAACTGTTCAAACTTGTGATT
CATATAATTCTATGTCACTTGTAAAATTTTATATTAAATTATGAATTAAT
AATTCAAATTTTAAAACTTAGTTTACCTCAAAACTCAAAAGGGTTGGTGA
ATGCACTGAATGAGAAGGACATGTCGGGCTTGCTGGCTTGGAAGCTGTAG
CGCAACAACTTGCAGTGAGTTTTGAGGGTTAAATTGCTGCACTTGTAGCC
TATGGATGGGAGAAACTAACAGAGATGACATGCAGTGTAGTAGGGTAAGT
GGGAAACAAGGTCAGGGCAGGGGATCGGGAAAAAGGAGGATATGTTTGGA
ATTTAGGGTTAATTGGGGACAAGTGGTCCCTCTTATGTTTTTTTTTAATG
ACCCAAAACCTGGGCCTTTCAACTTTTTTGTCAAACTTGGGCTCTTGCCC
TCCAACCCCTATTTTTGGCTCTAGCCTTTTTYYTTTTTTTTAAWTACCTA
GTTATGTGGATTTTTWWTTTTTTGGTGCCTTTTCAATTTTGGCCCCAGAC
CAGTGCCCTGGTAGCACTGGGCATGGGCTGGGCCTGGGCTGAGCCTGGTG
GGAGGAAGACAGATGAACCCTCTGGTGCTTGCTCATGAGCTTGTTCGCTT
TGAAAACCTTCTCGTCGCACGCTCAGAAGAGAGCTGCCTCGTCGGCGCAT
CAAAGGACGTTCGCCTTCCCTACCTCGCAGACGTTGCATTGTATCTTTAT
CTCTTTCTAAACCCTTCCAAAATCTCTGCTTTTGTGAGTTATGTTGGTGT
CTATCTCTCTACAGTTGAAGGATAAGGAGCAAGCTTGGCCCAGGCCCAGG
CCCAATGTTGGTAGGGCGATCGTCCGGGGCCCAAAATAATTAGTGGCACC
AAAATTATTAGGGTGGTATATTTATATATGTTTTCATAAAAGTATAAATT
TATAAATTTTGGTTCATTGACAAAGAAATTTATCTAGAACTGGTGGTTTT
GTTGTTTGAAATTAATGAGGAGGTCTTGAATTCAAAACACCATGTGTGCT
TATTTACCTTTCAATTTTTACAAATTTCTTTTCATAAGAGTATAAATATA
TCAAATTTGGCTGAATAATCAAGAAGTTTAATTAGAATCAATGGTTTTTG
TTGTTTAAAATTAAAGAGAGATCTTAAGTTTGAAATGCTAAGTGCATGTT
TATTCTTTTCAATTTTTACAAATTTTTGTTTGGTTAATCTATTTTTAATT
AGTAGCTAGTAGCTATTTGGGTTGTTATTTTTAAACAGTTGTTCCAATTC
AAGTCTAATATTCAACAAAGAATAATACGTTGACCAAATTTTTAGACCAA
ATTTGCAAATCATATGACATATCATCAAAAAGTTTAATTTAGTACCCATT
TATTACTTATACATATCAATGAAAACTCAAAAACATCATTATTTTTTTAA
TCCCATATTGACAAGGTTAGTATGTAACATCCCACATCGTCCAGGGGAGT
GATCCTTAAATGTATATTCTCATCCATACCTGGCACGAGGCCTTTTGGGA
GCTCACTGGCTTCGAGTTTCGTAGGAACTCCGAAGTTAAGCGAGAATGAG
GCCAGAGCATTCCCAAGATGGGTGACCCACTGGGAAGTTGCTCGTGAGTT
CCCAAAAAAAACTGTGAGGGAATAGGTAAAGGCCCAAAAGGTGGAACCGA
AACTAAGTACCAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTCGGGTTTCGGAACTCTAAAGTTAAGCGAGAATGAGGCCAGAGCAT
TCCCAAGATGGGTGACCCACTGGGAAGTTGCTCGTGAGTTCCCAAAAACA
AAACTGTGAGGGAATGGTAAGCCCAAAGTGGACAATATCATGCTACGGTG
GTGGAACGGGTCCCAGATGCGGTTGACCCAGGCATGTATATTCTCATCCC
TACCTAGCACGAGGCCTTTTGGGAGCTCACTGGCTTCGGGTTTCGGAACT
CTAAAGTTAAGCGMTACGRKGSYAGARCRSTCCMGRKMWGGATGACCYWY
TGGGAAGTWGCTTGTGAGTTTCCYAARAACRAARCCGTKAAGGAATGSTA
AGCCCARAGCGGACAATATCGTGCYACGRTGGTGAAACGGGCCCGGGATG
TGGTGGACTCAGGTCGGAATGTGACAAATGGTATCAGAGCMAATCCCTGG
CCGGAAGTGTGTCGACGAGGATRTTRKGCYMCTAAGGKGGGTGGAYTGYA
ACATCTCASATCACCCAGGSGAGTGATCCTTAAATGTATATTCTCATCCC
TACCTAGCACRAGGMYTTTTGGGAGCTCACTGGCTTCGGGTTCTATMGGA
AYTCYRAAGTTAAGCGAGAAARAGGYCAGAGCACTYCCAGGATRGGTGAC
CCACTGGGAAGTGCTCRTGAGTTCCYAAAAACAAAACCGTGAGGGAATGG
TAAGCCCAAARCGGACAATATCGTGCTACGGTRGTGGAACGGGGCCGGGA
TGTGGTGRACTCAGGCCRGGATGTGACATAGYRAATAAGAAAAAACACCT
CACGATTTATACMARAACWCTTTAAAAGTTCAGMKRGAAMRARRMMARAY
CTCATATCTATCTACTKGKAAACCTTGAGTTTTTTTTGTTTCCTTCTCAT
GATACAAAATAAATTAGTTTTTCCGTGTTTCTAAATTATTAAGTTTGAAG
TTATTTTAAGTATAATTTTATTGATGTTTTACGTGTGAAAACAAATAATT
TTTTTTTWTATACAGTGAGGGCACATTTTTTGACATCATTCCTGGCCTCA
TAAATCTCTAGACCAGCCCTGATGGGGAGCGAGAGTAAAAAATGATGGAC
TTTTTATGAGGACAGCGAGCAATTTCAAGGTGACACGTGGAGGGTTTTAA
CAAGTGTCGTGGCTTAGGAGGCTGCCGTTGCTTTGCAACTGTAAATTGGA
CGATATTTTTGTTTACAAATATCTTTGGGAAATTAACTGACACTGTGTTC
CGACAAACAAAAATTGACAACTTCATTCGGGTCGGGTTTTGATTGGCTCT
TATCTATTGGGTTTAAAAGTTGAATTAGCAAAACGGGTTTGGACAAGTCA
GTTGTAATTTGGATGAATTAGCGAATTCTATTCCAACATGTTATTTTAAA
GTGATGTGAGTGTGGCCAAATTGATTAGAACAAATGTGTTCCCTTTATAC
ATCAACTGAAAATACTACGGAGATCGTTTTTTTATAACACAAGGTGTTCT
TTTTATACTTTTTTTTAGTAGTGTTAGTTCAAGTTGGAATGAATTAAMAA
TCATAACAARCTCGTGTATAGTTATTGATTACTTTTTCAATTATCCTCAC
ACTAAATTTTAAACGGTTTGTTTTCGAGTTTAGGTAACTTGTCCCACTAC
ATAAACACGAGGGATTTTTCAGTGTGACTGTCATACGAGGTGATACACCA
CGTGTCTCCATATAAATGGTGTGTGTGTTAAAAGGTTAATAACTTAAAAA
TTAAAATTTTCCACCATTTACACACAAACACGTGATATATCATCCGTGTT
CCCGTCACAACTAAAAATTTCTCCATAAAACCACCTGAATCCACAAAACG
ACGGCCTAGTTTAGAATGGACATCGACCGGCGCAAGTAGGCAACATATGG
AGGGTACCCAAATTAATGAGAAGGCTCACTCAAGGACTGGCATTGTTTGG
TATGGGATGGTAGACCTTTCTTGTTGAGGTTTTGAACTTAAATGAGATGA
GATGTAGGAACCAGTGGCGAAGCCACGGAGGTGCGGCCGCCCCTCTGGTC
GCCGGAATTCATGCCTAAGATCCAGATTTCTGCCCCTCTGCTAGCAGTTG
CCGCTCTGCTTTGCCAGCGATAGTTTTGGTACTCTGCGCGGCGCCGCTAC
GTTTCTGCTTTTTTGTTTAAATCCCAGGCAAATGGCGTAGTTGTGGAAAG
GTAGAATTAAGTGAAACAGTGCGTAGACAGCCAAAGTAAAAGGGATCGTT
TTCAAGGATGGGGTGCAGTGGCACTAGAGCCAAGAAAACTCCCATCTCAT
CCAAGGTTCRAATCCCCYWMCCCCAAATTTAACCAATGACAAAAAAAAAA
AARAAAAAACAAACAGACAGGGASCARGGGACCACACTTGTCCCCCACCC
CCAATTATGTTAAAACTTAAATGGTTGGTGTTTGATTTTCTTTGTTTGTC
CAAAAAAAAAATAGTGATTCATTTTCTTTATCTTGACCGTCCATTTCGTT
TGGCAAACCCACCACTTTCATTTAAATCATGTTATTTTGTACAACACTGC
AAGACCCGTCTAGGTTCCACAATTTTTAATTAATCAAAGTATAATTACAA
CTTTTAATTATATTAACAAGGAATAAAAATAGTGAAATTTTAACTTTTCG
TGTTAGTATAATACATGTGGCATGAGTATAAGCGAGAAGGTTGAAATAAA
AGACTAATGTCACATGTATTCCAACAACACAAAATCTAAAAATTTAACTA
TATTGAAATCCCACTATTTTTGTTCCTTGTCGATATAATTAAAAGTTATA
ATTAAAGTGTGATTACTTATGTTTTGGTGATCTATTTGTTCAGAGTTTTC
CTAGCTAAGTTTGTAAATCCGATTAACAGGAGATATATCACTCGTCAAAG
AAAATGATGAAATGAGATATTAATGGTTGACTGATAACATGATTGTTTAC
ATTGAGAGATATGTCTTTTTCTTTTTTTATTGATAATGAGCCTATTATGT
GATATTTTTATGACATGAAACCTCGTAGACAACAACTGTAACTTGTTTGT
ATTGATAAATTAAGAATGACATTAATGTTAATGACTATCTAAAAGAATTT
GGTTATCTACAGTTTCCTGGGACTTTTACCCTTTTAAATATCGCCCCTCC
CCTAAACAATTTCTGACTTCGCCACTGAGTGGGAAGCCTTTGGAATGCAA
GTTTTGTGATCTTCAATTGGTTGATTTGAAGATATTGCCTAGAAATGCAG
CTGATGATGCTTTCCTTTCCTTAGAATGTTGGAATATGAGTATGAAACAT
GTTTGAGGATTAGCTATAATATTGGATGAATTCTTGAATGGAAAAAGTCT
TGATAAGGTGTTTKGTWGRATTTTTTTATGAGTGCTTTTAGTGTACCTCT
GGAAAAGGTTTCGGATCCTACACTAATTGATCTTGTACACTCATTGTGTG
AAAAGGTTTTGTTTTAGAGTTCAACACTAATTCTAATAGGTGAATGAGTT
GGATTAATGTTGTATATAACCTCAATCACTGCTCTTGCAAAGACACGGCT
CATCTTGTATTGAATACCTATTATTCAGAGAGTTTTTTCTAGTTTTGCTA
AAGAGGAGAAGATTGCTTGGTTGTGAAGCTGCTATGGCTTCTTCGAGTTC
AAGTTCTGCAGGTATGTTTTCCACTGGTTTCATATTCGTGTTTATAGTTT
TGTCACTTAGTTCGATTGTTGGAGTATTGGTAACTTACTGGCATATCTTT
GATCTGTGATATAGTTCTTACATAGAAATCCTAAATTCATAAACAAAAGG
TGGTAAACTGAAAGAATTATTCTGGGGGAATTTTGGCAAAGGCGTGAGAA
AGTTCCAGGTTAAGGCTTTGCAAAAAGTACAATGAGTTTCTGAAATTCAA
GGGGCACTTATCTGATCCTCTCCTTGTATGTGATGTTTTGGGAAAACCTG
GTGAAGATGGAAAAGAACGTTCTGGCAATTATTATGCAGATAAGGTTCTA
GAAATGCTAGCAGCGGACTTGGGAGAGAATGCGAAGAGAAAATCAGCGCC
CATTTGGCAGATTCTCTTGAGTTTCTTATATAGGAATGGTCAAGGAGCAT
TAGTGTCTCTTTCAAGTCACAGTGGTGTATCGTCTACCGGAATTCTCAAA
CCTTTCACAGTTTCTTCGGCTCTGCTGTTTATTGTGGATGAAGGATTTCA
CCCTCAGACAAAAGTGCATGATATTGGTGGAGCAAAAGCAGGCCAATTAA
GTCGAAATATGAAGAATGGGATTTGCGAGCCGAATGCTGATCGGGACCAT
ACTGGGCCATCCAATAAGCATTCTGCAGGGAAGGAGGGAAGCAAGAGAAA
TAACAAAAGAAATTCACAGTTGCTACAAGATCTCACATGGAGTGCCTTCT
GCAAGGCAGCATTTGAACACTCAGAGATAGGTTTGGAAGAGGTTTACTTT
GCCAGGGAATGTTATAACTAAAAAAAGATRCGATTTCTGAAATGCTGGAT
GAAACAGATTAAGAAGTCTAGYGATCGTGGTCTAATAGTGGAGAAAGAAT
CCCAGGCAGACCAGCTCAATAAGAAAAGGGATGGGCAATAGGTTGGATAA
CTTGCACCATGAAAGTGACAGCCAATTTCTTCATCTCCTTCCATTGGAGA
AAATTCNTTGACTGTGGCTTCTGGCATACAAGATGAAGCTGCTTTGGAA
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