RosBREED_snp_tart_cherry_f_Pp1_35969616, RosBREED_snp_tart_cherry_f_Pp1_35969616 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_35969616
dbSNP IDss490546702
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_35969616
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A54.84RosBREED_snp_tart_cherry_f_Pp1_35969616View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A138.34RosBREED_snp_tart_cherry_f_Pp1_35969616View
3Sour Cherry-M172x25-F1LG1N/A111.37RosBREED_snp_tart_cherry_f_Pp1_35969616View
4SourCherry-Montx25-F1LG1N/A111.37RosBREED_snp_tart_cherry_f_Pp1_35969616View
5SourCherry-25x25-F1LG1N/A111.37RosBREED_snp_tart_cherry_f_Pp1_35969616View
6Sour Cherry-US-F1LG1N/A111.37RosBREED_snp_tart_cherry_f_Pp1_35969616View
7SourCherry-RE-F1LG1N/A111.37RosBREED_snp_tart_cherry_f_Pp1_35969616View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_35969616 ID=RosBREED_snp_tart_cherry_f_Pp1_35969616; Name=RosBREED_snp_tart_cherry_f_Pp1_35969616; organism=Prunus cerasus; type=genetic_marker; length=207bp
CTTGACTTCTGAAGCTATGCTTTGGCTTTATTCTATTTCTTTTGACAGTA
GTGGATTGAGGGTCCGGGAAGATCCATGCTATGTTTCATGTTTGTATTGC
T[T/C]AACTGTTTTCATTTTAGATACTTACGTTAAAAGGATAAAGAAGG
CCAGAGTTATCTCATGAATATTAAACAGTTTTTGACTTTGAGAGTAAAAC
AAGTCTC
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:35969616..35969616. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:36942828..36942828. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:31983328..31983328. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)