RosBREED_snp_tart_cherry_f_Pp1_12871785, RosBREED_snp_tart_cherry_f_Pp1_12871785 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_12871785
dbSNP IDss490546112
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_12871785
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A23.57RosBREED_snp_tart_cherry_f_Pp1_12871785View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A65.09RosBREED_snp_tart_cherry_f_Pp1_12871785View
3Sour Cherry-M172x25-F1LG1N/A43.13RosBREED_snp_tart_cherry_f_Pp1_12871785View
4SourCherry-Montx25-F1LG1N/A43.13RosBREED_snp_tart_cherry_f_Pp1_12871785View
5Sour Cherry-US-F1LG1N/A43.13RosBREED_snp_tart_cherry_f_Pp1_12871785View
6SourCherry-RE-F1LG1N/A43.13RosBREED_snp_tart_cherry_f_Pp1_12871785View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_12871785 ID=RosBREED_snp_tart_cherry_f_Pp1_12871785; Name=RosBREED_snp_tart_cherry_f_Pp1_12871785; organism=Prunus cerasus; type=genetic_marker; length=207bp
GCTCACCTTTGGCTCTTGGTAGGTGTGGCCTTCTGAAGCTTGTATCCTCC
AAGCATGCCTTTGCGCTAATGACTGCTCCAAGCAGTCAAACAGTACTTTC
A[T/C]GCTTGTATGGGTCCACCAAAGTCTTGAAATTCACTGTAATCAAC
ATAGGAAATTGGAAACACAAGGATCAAGCTTTGGGGTTTTGAAGTCTGCC
TACGTAA
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:12871785..12871785. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:13320013..13320013. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:10636522..10636522. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)