RosBREED_snp_tart_cherry_a_Pp8_17065642, RosBREED_snp_tart_cherry_a_Pp8_17065642 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp8_17065642
dbSNP IDss490551323
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp8_17065642
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate8N/A39.65RosBREED_snp_tart_cherry_a_Pp8_17065642View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate8N/A63.9RosBREED_snp_tart_cherry_a_Pp8_17065642View
3Sour Cherry-M172x25-F1LG8N/A58.85RosBREED_snp_tart_cherry_a_Pp8_17065642View
4SourCherry-Montx25-F1LG8N/A58.85RosBREED_snp_tart_cherry_a_Pp8_17065642View
5SourCherry-25x25-F1LG8N/A58.85RosBREED_snp_tart_cherry_a_Pp8_17065642View
6Sour Cherry-US-F1LG8N/A58.85RosBREED_snp_tart_cherry_a_Pp8_17065642View
7SourCherry-RE-F1LG8N/A58.85RosBREED_snp_tart_cherry_a_Pp8_17065642View
Sequence
>RosBREED_snp_tart_cherry_a_Pp8_17065642 ID=RosBREED_snp_tart_cherry_a_Pp8_17065642; Name=RosBREED_snp_tart_cherry_a_Pp8_17065642; organism=Prunus cerasus; type=genetic_marker; length=207bp
AATTAACCAATTATAAACTCTGATCTGCATAATTGACTTTAATAAATCAT
ATAACACTATGGCTAGGAAGGATGCATGGTTTCGTTTGGTCGACATAGGG
T[T/C]ATTAGGTTAATGCCACTCGTGCAACAGCATACTCTGAGATTTTT
ATATGCAAATGAGTTGTTATGCTGGTGTGGGAAGAGACATTGCATAAACA
TTGCCTA
Alignments
Feature NameTypeLocationAnalysis
scaffold_8 supercontig scaffold_8:17065642..17065642. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp08 chromosome Pp08:17810101..17810101. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr8 chromosome PAV_r1.0chr8:14802999..14802999. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)