RosBREED_snp_tart_cherry_a_Pp1_16541503, RosBREED_snp_tart_cherry_a_Pp1_16541503 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_16541503
dbSNP IDss490546145
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_16541503
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A26.41RosBREED_snp_tart_cherry_a_Pp1_16541503View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A71.83RosBREED_snp_tart_cherry_a_Pp1_16541503View
3Sour Cherry-M172x25-F1LG1N/A46.68RosBREED_snp_tart_cherry_a_Pp1_16541503View
4SourCherry-Montx25-F1LG1N/A46.68RosBREED_snp_tart_cherry_a_Pp1_16541503View
5SourCherry-25x25-F1LG1N/A46.68RosBREED_snp_tart_cherry_a_Pp1_16541503View
6Sour Cherry-US-F1LG1N/A46.68RosBREED_snp_tart_cherry_a_Pp1_16541503View
7SourCherry-RE-F1LG1N/A46.68RosBREED_snp_tart_cherry_a_Pp1_16541503View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_16541503 ID=RosBREED_snp_tart_cherry_a_Pp1_16541503; Name=RosBREED_snp_tart_cherry_a_Pp1_16541503; organism=Prunus cerasus; type=genetic_marker; length=207bp
TGCTATGCTATAGATTTTCAAGATCGATGGAGAGCATGATCAAGGCTCCT
ATATTCTTTTGTTTCCTTTCTGCACTCATTTTCCTCATGCTTTTTACAAA
C[A/G]TGGGCAAGTAACTTTAATCCATTTGAAGCTCATACATGTGTGAG
AAGAAAATTATATTTTGGTTCTTCATGCATATTCTTTATAGACAGTCTGT
GAAGGCT
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:16541503..16541503. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:17515803..17515803. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)