RosBREED_snp_tart_cherry_a_Pp1_39776257, RosBREED_snp_tart_cherry_a_Pp1_39776257 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_39776257
dbSNP IDss490546814
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_39776257
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A67.71RosBREED_snp_tart_cherry_a_Pp1_39776257View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A152.34RosBREED_snp_tart_cherry_a_Pp1_39776257View
3Sour Cherry-M172x25-F1LG1N/A122.41RosBREED_snp_tart_cherry_a_Pp1_39776257View
4SourCherry-Montx25-F1LG1N/A122.41RosBREED_snp_tart_cherry_a_Pp1_39776257View
5SourCherry-25x25-F1LG1N/A122.41RosBREED_snp_tart_cherry_a_Pp1_39776257View
6Sour Cherry-US-F1LG1N/A122.41RosBREED_snp_tart_cherry_a_Pp1_39776257View
7SourCherry-RE-F1LG1N/A122.41RosBREED_snp_tart_cherry_a_Pp1_39776257View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_39776257 ID=RosBREED_snp_tart_cherry_a_Pp1_39776257; Name=RosBREED_snp_tart_cherry_a_Pp1_39776257; organism=Prunus cerasus; type=genetic_marker; length=207bp
AATGTGCAATTTTGGGTCTTGAAGTTTGTGATGGTCTTGTCTAGGGTTTT
AGTGATGGAGCTAAATGAGGATAATAATCAAATCTTAAATCTTAACCATC
A[A/G]ATCAAAATCAATATGTGTTTTTCCTCAGCAAGTAATACTGGGTT
TCTAGGTGGTAAAGCCATGGAGCAAAGAGAAGGGGACAAAGTAAGTTTTA
TGTGCCC
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:39776257..39776257. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:40749522..40749522. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)