RosBREED_snp_tart_cherry_f_Pp1_22682218, RosBREED_snp_tart_cherry_f_Pp1_22682218 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_22682218
dbSNP IDss490546205
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_22682218
TypeSNP
SNP AllelesT/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A30.86RosBREED_snp_tart_cherry_f_Pp1_22682218View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A82.39RosBREED_snp_tart_cherry_f_Pp1_22682218View
3Sour Cherry-M172x25-F1LG1N/A52.24RosBREED_snp_tart_cherry_f_Pp1_22682218View
4SourCherry-Montx25-F1LG1N/A52.24RosBREED_snp_tart_cherry_f_Pp1_22682218View
5SourCherry-25x25-F1LG1N/A52.24RosBREED_snp_tart_cherry_f_Pp1_22682218View
6Sour Cherry-US-F1LG1N/A52.24RosBREED_snp_tart_cherry_f_Pp1_22682218View
7SourCherry-RE-F1LG1N/A52.24RosBREED_snp_tart_cherry_f_Pp1_22682218View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_22682218 ID=RosBREED_snp_tart_cherry_f_Pp1_22682218; Name=RosBREED_snp_tart_cherry_f_Pp1_22682218; organism=Prunus cerasus; type=genetic_marker; length=207bp
TTCTCCATATAATAGAGGCCTATCGCAGTATGGCATTGGCACATGTGTTG
AACTTAAAAAAAGAAGAGAGGAAAGCACTTTGTAAAGGAGCTTCTTAAAA
A[T/G]CTAGACAAGAGGGTCGTTGTCAAAATTAGCAATGTGATTCAAAG
ATTAACACAACAAGGGTTAATTAAGGGTTAATTAGAATCTCACTCTCAAG
ATTGATC
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:22682218..22682218. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:23656522..23656522. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)