RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1, RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1
Aliasss475875753
rs267608704
c475875753
SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1
AX-105215187
dbSNP IDss475875753
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1
50K SNP array for apple:RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTCTTGGGGGAGCAAAGCAGCTCCAAGTACAGCTTC
3' Flanking SequenceTCCTGGGGTGCAGCAGCAGGAGCACCTGCAGATAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1 ID=RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1|Name=RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1|organism=Malus x domestica|type=genetic_marker|length=71bp
TCTTGGGGGAGCAAAGCAGCTCCAAGTACAGCTTCRTCCTGGGGTGCAGC
AGCAGGAGCACCTGCAGATAA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20137N/A39.48RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1View
2Apple-M432-2013-physical-Malus-domestica1N/A16998097RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC013614.444 contig MDC013614.444:1210..1210. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr07 chromosome Chr07:24237119..24237119. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr07 chromosome Chr07:24237118..24237118. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation