RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1, RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1
Aliasss475879712
rs267612658
a475879712
SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1
AX-105192025
dbSNP IDss475879712
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1
50K SNP array for apple:RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1
TypeSNP
SNP AllelesT/G
5' Flanking SequenceACCTCAGAATCCGGCCACACCCACATCACACGAGT
3' Flanking SequenceACTCACCTCTCTGATCTCTCTCTCTCGACTTCTCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1 ID=RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1|Name=RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1|organism=Malus x domestica|type=genetic_marker|length=71bp
ACCTCAGAATCCGGCCACACCCACATCACACGAGTKACTCACCTCTCTGA
TCTCTCTCTCTCGACTTCTCA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20134N/A12.64RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1View
2Apple-M432-2013-physical-Malus-domestica10N/A13048668RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC019507.374 contig MDC019507.374:4371..4371. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:8328904..8328904. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:8328903..8328903. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation