RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1, RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1
Aliasss475879713
rs267612659
b475879713
SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1
AX-105195079
dbSNP IDss475879713
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1
50K SNP array for apple:RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGTTGGAATTGGGAGGTCAAAATCTGGGGCTATCTA
3' Flanking SequenceAGGCTCTGCATGGTCCGGAATGTTGATGCATCAG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1 ID=RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1|Name=RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GTTGGAATTGGGAGGTCAAAATCTGGGGCTATCTAYAGGCTCTGCATGGT
CCGGAATGTTGATGCATCAG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201310N/A89.44RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1View
2Apple-M432-2013-physical-Malus-domestica10N/A13051232RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC019507.374 contig MDC019507.374:6935..6935. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:8331468..8331468. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:8331467..8331467. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation