RosBREEDSNP_SNP_CT_35144800_Lg12_01665_MAF50_1680916_exon3, RosBREEDSNP_SNP_CT_35144800_Lg12_01665_MAF50_1680916_exon3 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_CT_35144800_Lg12_01665_MAF50_1680916_exon3

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_CT_35144800_Lg12_01665_MAF50_1680916_exon3

Type

SNP

SNP Alleles

T/C

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	12	N/A	56.48	RosBREEDSNP_SNP_CT_35144800_Lg12_01665_MAF50_1680916_exon3	View
2	Apple-M432-2013-physical-Malus-domestica	12	N/A	35144800	RosBREEDSNP_SNP_CT_35144800_Lg12_01665_MAF50_1680916_exon3	View

Alignments

Feature Name	Type	Location	Analysis
MDC017252.118	contig	MDC017252.118:540..540.	Malus x domestica Whole Genome v1.0 Assembly & Annotation