RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1, RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1
Aliasss475875742
rs267608693
a475875742
SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1
AX-105191193
dbSNP IDss475875742
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCCAAGGTTGACTTGGAGTTAAGTCTCTCCACTGGG
3' Flanking SequenceTGTCTGAATCTGAAATCACTTGTGTCAATCCAAG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1 ID=RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1|Name=RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
CCAAGGTTGACTTGGAGTTAAGTCTCTCCACTGGGYTGTCTGAATCTGAA
ATCACTTGTGTCAATCCAAG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201314N/A24.47RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1View
2Apple-M432-2013-physical-Malus-domestica1N/A1517899RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC012544.141 contig MDC012544.141:16986..16986. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:23025438..23025438. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr06 chromosome Chr06:23025436..23025436. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation