RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1, RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1
Aliasss475877763
rs267610709
a475877763
SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1
AX-105195099
dbSNP IDss475877763
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAAGGTGTCACATCTCAGTCCGCATAGTAAGATATT
3' Flanking SequenceTCCACTTTAGGCCACACCCTCACGGTTTTGTTCT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1 ID=RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1|Name=RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
AAGGTGTCACATCTCAGTCCGCATAGTAAGATATTRTCCACTTTAGGCCA
CACCCTCACGGTTTTGTTCT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-2013-physical-Malus-domestica3N/A31102332RosBREEDSNP_SNP_AG_31102332_Lg3_01779_MAF20_43168_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC012440.297 contig MDC012440.297:17291..17291. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:30353517..30353517. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:30353516..30353516. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation