RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3, RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3
50K SNP array for apple:	AX-105174597

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

ACTATAGTCACCCCATCCTTAAGTCCAAGAACTTG

3' Flanking Sequence

TCTGTCCATTCACTAGAGAATAGCCCCATTGGAT

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
MDC007541.97	contig	MDC007541.97:4447..4447 .	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
Chr01	chromosome	Chr01:19731247..19731247 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3 ID=RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3; Name=RosBREEDSNP_SNP_AG_20950306_Lg4_00686_MAF10_945597_exon3; organism=Malus x domestica; type=genetic_marker; length=70bp
ACTATAGTCACCCCATCCTTAAGTCCAAGAACTTGRTCTGTCCATTCACT
AGAGAATAGCCCCATTGGAT