RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2, RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2
Aliasss475880530
rs267613475
a475880530
SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2
AX-105190912
dbSNP IDss475880530
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2
50K SNP array for apple:RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAGGTAAAAGAAGATAAATGAATATGGGAATAACTT
3' Flanking SequenceTGTAGTCTTTTTGCGCCGATTAATTACATGTTCT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2 ID=RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2|Name=RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
AGGTAAAAGAAGATAAATGAATATGGGAATAACTTRTGTAGTCTTTTTGC
GCCGATTAATTACATGTTCT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A42.29RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2View
2Apple-M432-2013-physical-Malus-domestica12N/A28774744RosBREEDSNP_SNP_AG_28774744_Lg12_RosCOS3117_MAF30_1648278_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC036886.6 contig MDC036886.6:32210..32210. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08 chromosome Chr08:19728999..19728999. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:19728998..19728998. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation