RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1, RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1
Aliasss475876414
rs267609361
a475876414
SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1
AX-105183247
dbSNP IDss475876414
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceATGCAGGAACTGTATCAATCCCCTCCACCTTGTTC
3' Flanking SequenceACACGGGCATCGACGACAATGTGTTGGCTATCTC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1Malus x domesticamarker_locus
RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1-68.88Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1 ID=RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1|Name=RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
ATGCAGGAACTGTATCAATCCCCTCCACCTTGTTCRACACGGGCATCGAC
GACAATGTGTTGGCTATCTC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A47.3RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1View
2Apple-M432-2013-physical-Malus-domestica13N/A27018760RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1View
3Pear-PH-CG-2017LG3N/A68.88RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC008626.457 contig MDC008626.457:6478..6478. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:17666736..17666736. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:17666735..17666735. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation