RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1, RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1
Aliasss475880015
rs267612960
b475880015
SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1
AX-105210105
dbSNP IDss475880015
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1
TypeSNP
SNP AllelesA/C
5' Flanking SequenceGCCATGTGAGCTTCATATCACAGACTCTCAGTGGA
3' Flanking SequenceACTTCATCACTCTCTCTCTCTCTCTCTCTCTCTC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1 ID=RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1|Name=RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GCCATGTGAGCTTCATATCACAGACTCTCAGTGGAMACTTCATCACTCTC
TCTCTCTCTCTCTCTCTCTC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A1.7RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1View
2Apple-M432-2013-physical-Malus-domestica11N/A480323RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC018015.75 contig MDC018015.75:624..624. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:636071..636071. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation