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Marker Overview
Name | RosBREEDSNP_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1 |
dbSNP ID | ss475878138 |
SNP Array ID | IRSC 9K SNP array for apple: | RosBREEDSNP_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1 | 50K SNP array for apple: | AX-105200662 |
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Type | SNP |
SNP Alleles | A/C |
5' Flanking Sequence | AGGAGAACAAAGAGTTTTTGAGAGCAAATGGGATT |
3' Flanking Sequence | GGCTTTTCCAGTTTGGGATCGATGGCTCTCAGGT |
Species | Malus x domestica |
Publication | [view all] |
Alignments
The following features are aligned
Analyses
This genetic_marker is derived from or has results from the following analyses
Publications
Year | Publication |
2012 | Chagné D, Crowhurst RN, Troggio M, Davey MW, Gilmore B, Lawley C, Vanderzande S, Hellens RP, Kumar S, Cestaro A, Velasco R, Main D, Rees JD, Iezzoni A, Mockler T, Wilhelm L, Van de Weg E, Gardiner SE, Bassil N, Peace C. Genome-wide SNP detection, validation, and development of an 8K SNP array for apple. PloS one. 2012; 7(2):e31745. |
2020 | Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8 |
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Pear-PM-F1-PEAR3 | 10 | N/A | 64.42 | RosBREED_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1 | View |
Sequence
>RosBREEDSNP_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1 ID=RosBREEDSNP_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1; Name=RosBREEDSNP_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp AGGAGAACAAAGAGTTTTTGAGAGCAAATGGGATTMGGCTTTTCCAGTTT GGGATCGATGGCTCTCAGGT
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