RosBREEDSNP_SNP_GT_4923623_Lg2_RosCOS3565_MAF40_1644877_exon3, RosBREEDSNP_SNP_GT_4923623_Lg2_RosCOS3565_MAF40_1644877_exon3 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_GT_4923623_Lg2_RosCOS3565_MAF40_1644877_exon3

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_GT_4923623_Lg2_RosCOS3565_MAF40_1644877_exon3

Type

SNP

SNP Alleles

T/G

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
MDC022681.34	contig	MDC022681.34:1224..1224 .	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
Chr02	chromosome	Chr02:4712467..4712467 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	2	N/A	15	RosBREEDSNP_SNP_GT_4923623_Lg2_RosCOS3565_MAF40_1644877_exon3	View
2	Apple-M432-2013-physical-Malus-domestica	2	N/A	4923623	RosBREEDSNP_SNP_GT_4923623_Lg2_RosCOS3565_MAF40_1644877_exon3	View