RPOC1, JX118021.1-RPOC1.m2 (mRNA) Fragaria corymbosa

Transcript Overview
NameRPOC1
Unique NameJX118021.1-RPOC1.m2
TypemRNA
OrganismFragaria corymbosa ()
Sourcegenbank
ProductRNA polymerase beta subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPOC1JX118021.1-RPOC1Fragaria corymbosagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX118021.1-RPOC1.m2-cds1JX118021.1-RPOC1.m2-cds1Fragaria corymbosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
RPOC1JX118021.1-RPOC1.p2Fragaria corymbosapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI402238744
nuccoreJX118021.1
Alignments
Feature NameTypeLocationAnalysis
JX118021 region JX118021:1458..2065- NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX118021.1-RPOC1.m2 ID=JX118021.1-RPOC1.m2; Name=RPOC1; organism=Fragaria corymbosa; type=mRNA; length=608bp
atccattagtttgtaagggatttaacgcagactttgatggggatcaaatg
gctgttcatgtacctttatctttggaggctcaggcggaggcccgtttact
tatgttttctcatatgaatctcttgtctccagctattggggatcctattt
ccgtaccaacccaagatatgcttatcgggctctatgtattaacgagcggg
aatcgccgaggtatttgtgcaaataggtataatccatgtaatcgcacaaa
ttctaaaaatgaaaggattgccgataataattataaatatacgaacgaac
cctttttttgtaattcctatgatgcaattggagcttatcggcagaaaaga
atccatttagatagtcccttgtggctccgatggcagctagatcaacgtgt
tattacttcaagagaaactcccatcgaagttcactatgaatctttgggta
cctctcatgagatttatgggcactatgtaatagtaagaagtataaaaaaa
gaagttctttgtatatatgttcgaaccacagttggtcatatttctcttta
tcgagaaatcgaagaagctatccaagggttttgccgagcctactcgtatg
gtacctaa
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protein sequence of RPOC1

>JX118021.1-RPOC1.p2 ID=JX118021.1-RPOC1.p2; Name=RPOC1; organism=Fragaria corymbosa; type=polypeptide; length=201bp
PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS
VPTQDMLIGLYVLTSGNRRGICANRYNPCNRTNSKNERIADNNYKYTNEP
FFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQRVITSRETPIEVHYESLGT
SHEIYGHYVIVRSIKKEVLCIYVRTTVGHISLYREIEEAIQGFCRAYSYG
T
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mRNA from alignment at JX118021:1458..2065-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX118021.1-RPOC1.m2 ID=JX118021.1-RPOC1.m2; Name=RPOC1; organism=Fragaria corymbosa; type=mRNA; length=608bp; location=Sequence derived from: JX118021:1458..2065- (Fragaria corymbosa
ATCCATTAGTTTGTAAGGGATTTAACGCAGACTTTGATGGGGATCAAATG
GCTGTTCATGTACCTTTATCTTTGGAGGCTCAGGCGGAGGCCCGTTTACT
TATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATTGGGGATCCTATTT
CCGTACCAACCCAAGATATGCTTATCGGGCTCTATGTATTAACGAGCGGG
AATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCGCACAAA
TTCTAAAAATGAAAGGATTGCCGATAATAATTATAAATATACGAACGAAC
CCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGGCAGAAAAGA
ATCCATTTAGATAGTCCCTTGTGGCTCCGATGGCAGCTAGATCAACGTGT
TATTACTTCAAGAGAAACTCCCATCGAAGTTCACTATGAATCTTTGGGTA
CCTCTCATGAGATTTATGGGCACTATGTAATAGTAAGAAGTATAAAAAAA
GAAGTTCTTTGTATATATGTTCGAACCACAGTTGGTCATATTTCTCTTTA
TCGAGAAATCGAAGAAGCTATCCAAGGGTTTTGCCGAGCCTACTCGTATG
GTACCTAA
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Coding sequence (CDS) from alignment at JX118021:1458..2065-

>JX118021.1-RPOC1.m2 ID=JX118021.1-RPOC1.m2; Name=RPOC1; organism=Fragaria corymbosa; type=CDS; length=608bp; location=Sequence derived from: JX118021:1458..2065- (Fragaria corymbosa
ATCCATTAGTTTGTAAGGGATTTAACGCAGACTTTGATGGGGATCAAATG
GCTGTTCATGTACCTTTATCTTTGGAGGCTCAGGCGGAGGCCCGTTTACT
TATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATTGGGGATCCTATTT
CCGTACCAACCCAAGATATGCTTATCGGGCTCTATGTATTAACGAGCGGG
AATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCGCACAAA
TTCTAAAAATGAAAGGATTGCCGATAATAATTATAAATATACGAACGAAC
CCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGGCAGAAAAGA
ATCCATTTAGATAGTCCCTTGTGGCTCCGATGGCAGCTAGATCAACGTGT
TATTACTTCAAGAGAAACTCCCATCGAAGTTCACTATGAATCTTTGGGTA
CCTCTCATGAGATTTATGGGCACTATGTAATAGTAAGAAGTATAAAAAAA
GAAGTTCTTTGTATATATGTTCGAACCACAGTTGGTCATATTTCTCTTTA
TCGAGAAATCGAAGAAGCTATCCAAGGGTTTTGCCGAGCCTACTCGTATG
GTACCTAA
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