RPOC1, JX118021.1-RPOC1.m2 (mRNA) Fragaria corymbosa

Transcript Overview
NameRPOC1
Unique NameJX118021.1-RPOC1.m2
TypemRNA
OrganismFragaria corymbosa ()
Sourcegenbank
ProductRNA polymerase beta subunit
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
JX118021regionJX118021:1458..2065 -NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPOC1JX118021.1-RPOC1Fragaria corymbosagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX118021.1-RPOC1.m2-cds1JX118021.1-RPOC1.m2-cds1Fragaria corymbosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
RPOC1JX118021.1-RPOC1.p2Fragaria corymbosapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI402238744
nuccoreJX118021.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX118021.1-RPOC1.m2 ID=JX118021.1-RPOC1.m2; Name=RPOC1; organism=Fragaria corymbosa; type=mRNA; length=608bp
atccattagtttgtaagggatttaacgcagactttgatggggatcaaatg
gctgttcatgtacctttatctttggaggctcaggcggaggcccgtttact
tatgttttctcatatgaatctcttgtctccagctattggggatcctattt
ccgtaccaacccaagatatgcttatcgggctctatgtattaacgagcggg
aatcgccgaggtatttgtgcaaataggtataatccatgtaatcgcacaaa
ttctaaaaatgaaaggattgccgataataattataaatatacgaacgaac
cctttttttgtaattcctatgatgcaattggagcttatcggcagaaaaga
atccatttagatagtcccttgtggctccgatggcagctagatcaacgtgt
tattacttcaagagaaactcccatcgaagttcactatgaatctttgggta
cctctcatgagatttatgggcactatgtaatagtaagaagtataaaaaaa
gaagttctttgtatatatgttcgaaccacagttggtcatatttctcttta
tcgagaaatcgaagaagctatccaagggttttgccgagcctactcgtatg
gtacctaa
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protein sequence of RPOC1

>JX118021.1-RPOC1.p2 ID=JX118021.1-RPOC1.p2; Name=RPOC1; organism=Fragaria corymbosa; type=polypeptide; length=201bp
PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS
VPTQDMLIGLYVLTSGNRRGICANRYNPCNRTNSKNERIADNNYKYTNEP
FFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQRVITSRETPIEVHYESLGT
SHEIYGHYVIVRSIKKEVLCIYVRTTVGHISLYREIEEAIQGFCRAYSYG
T
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mRNA from alignment at JX118021:1458..2065-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX118021.1-RPOC1.m2 ID=JX118021.1-RPOC1.m2; Name=RPOC1; organism=Fragaria corymbosa; type=mRNA; length=608bp; location=Sequence derived from: JX118021:1458..2065- (Fragaria corymbosa
ATCCATTAGTTTGTAAGGGATTTAACGCAGACTTTGATGGGGATCAAATG
GCTGTTCATGTACCTTTATCTTTGGAGGCTCAGGCGGAGGCCCGTTTACT
TATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATTGGGGATCCTATTT
CCGTACCAACCCAAGATATGCTTATCGGGCTCTATGTATTAACGAGCGGG
AATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCGCACAAA
TTCTAAAAATGAAAGGATTGCCGATAATAATTATAAATATACGAACGAAC
CCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGGCAGAAAAGA
ATCCATTTAGATAGTCCCTTGTGGCTCCGATGGCAGCTAGATCAACGTGT
TATTACTTCAAGAGAAACTCCCATCGAAGTTCACTATGAATCTTTGGGTA
CCTCTCATGAGATTTATGGGCACTATGTAATAGTAAGAAGTATAAAAAAA
GAAGTTCTTTGTATATATGTTCGAACCACAGTTGGTCATATTTCTCTTTA
TCGAGAAATCGAAGAAGCTATCCAAGGGTTTTGCCGAGCCTACTCGTATG
GTACCTAA
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Coding sequence (CDS) from alignment at JX118021:1458..2065-

>JX118021.1-RPOC1.m2 ID=JX118021.1-RPOC1.m2; Name=RPOC1; organism=Fragaria corymbosa; type=CDS; length=608bp; location=Sequence derived from: JX118021:1458..2065- (Fragaria corymbosa
ATCCATTAGTTTGTAAGGGATTTAACGCAGACTTTGATGGGGATCAAATG
GCTGTTCATGTACCTTTATCTTTGGAGGCTCAGGCGGAGGCCCGTTTACT
TATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATTGGGGATCCTATTT
CCGTACCAACCCAAGATATGCTTATCGGGCTCTATGTATTAACGAGCGGG
AATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCGCACAAA
TTCTAAAAATGAAAGGATTGCCGATAATAATTATAAATATACGAACGAAC
CCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGGCAGAAAAGA
ATCCATTTAGATAGTCCCTTGTGGCTCCGATGGCAGCTAGATCAACGTGT
TATTACTTCAAGAGAAACTCCCATCGAAGTTCACTATGAATCTTTGGGTA
CCTCTCATGAGATTTATGGGCACTATGTAATAGTAAGAAGTATAAAAAAA
GAAGTTCTTTGTATATATGTTCGAACCACAGTTGGTCATATTTCTCTTTA
TCGAGAAATCGAAGAAGCTATCCAAGGGTTTTGCCGAGCCTACTCGTATG
GTACCTAA
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