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Transcript Overview
| Name | ERF3 |
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| Unique Name | JF412350.1-ERF3.m1 |
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| Type | mRNA |
|---|
| Organism | Malus x domestica (Apple) |
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| Source | genbank |
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| Product | ethylene response factor 3 |
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| Genbank Note | contains AP2/ERF domain conserved motif 10-1 based on Nakano et al (Plant Physiology, 2006) |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| JF412350.1-ERF3.m1-cds1 | JF412350.1-ERF3.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ERF3 | JF412350.1-ERF3.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| JF412350 |
region |
JF412350:29..1447+ |
NCBI Rosaceae gene and mRNA sequences |
| Chr05 |
chromosome |
Chr05:4961136..4963142+ |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
| chr5 |
chromosome |
chr5:20364544..20366549+ |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
| chr5 |
chromosome |
chr5:23141903..23143908- |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JF412350.1-ERF3.m1 ID=JF412350.1-ERF3.m1; Name=ERF3; organism=Malus x domestica; type=mRNA; length=1419bp
atgtgcttactgaaggtggcgaaccagaggagctcaggaggcggcggtca
atacgacaggtttggctctcaaaacgatagtaccgatgttactgctgtag
atattgataatatcaactacggcggcgtaggattggagtcgccgccgccg
tatcatcaacagcacgtgtcgctgtcgacgccgacaatgtttttggggta
cagtcaggcggcaacggagatgtcggcgatggtgtcggctttgacgcatg
tcgtttccggacagagaggcagcgacagctggggacatgttggaagcggt
ggagttacgtctagtttcggccaactttattcttcttcatttccatctgc
ttctcctttgtcagctgctttttcttcaagtgcttctcctggtcctcaca
attgggtcggtcaaaagagagggcgcgaagaagatttggattctgcttct
gcttctgcttctgctcaaacccaattcatggaatctggtaatagagcttt
taggggtggctatagtgattacagaggaacacaatcagagtctccatctg
gtggtgcaagtgcaactgtgacagaagaaagtacaaatttttccaccgcc
accgtctcggccaccacagcggtaccaaccacaccatcaagtacagaatc
tgtttcatttgaagaaactggtgagaggaagagaagatacaggggagtta
gacagaggccctggggaaaatgggcagctgagatacgcgatccacacaaa
gctgcaagagtctggcttggcacattcgacacggcggaggcagccgcccg
agcctacgatgaagctgctctaagattcagaggaaacagagctaaactaa
acttcccagaaaacgtcagactcgttcaaccaccaccaccaccaccaact
ctccaaaccttcaattcaaattctagaccaacacaatatgctcagccgtt
gcagccaccgccgcttccacaaccaccacaacagcagctctatcactccc
agcagcttttcatccaaccctcctccgacctcctccgagattacttcgac
tactctcagctccttcaaagctccgctgacttccatccacagcagcaacg
acaacagcaaccctcaagtttgctgcaaaaaatgtactacaattcccagt
tggcgtcacttcaatcttcttttctacaacctgcatcggcatccactcca
tcttctgcattgccgtcctctgcctcctcctctgcttcatttcctctgtt
tttctctgagcagaatcagcaaatggggtttttccggcagccgcanaatc
cgaaccagggtggtccgtctgatttccaggcaccatcttggtctcattcc
ggcacaatccatcctcatccagttgatactttcatgaatactttttgttt
tctttctttattttattaa back to topprotein sequence of ERF3 >JF412350.1-ERF3.p1 ID=JF412350.1-ERF3.p1; Name=ERF3; organism=Malus x domestica; type=polypeptide; length=472bp
MCLLKVANQRSSGGGGQYDRFGSQNDSTDVTAVDIDNINYGGVGLESPPP
YHQQHVSLSTPTMFLGYSQAATEMSAMVSALTHVVSGQRGSDSWGHVGSG
GVTSSFGQLYSSSFPSASPLSAAFSSSASPGPHNWVGQKRGREEDLDSAS
ASASAQTQFMESGNRAFRGGYSDYRGTQSESPSGGASATVTEESTNFSTA
TVSATTAVPTTPSSTESVSFEETGERKRRYRGVRQRPWGKWAAEIRDPHK
AARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRLVQPPPPPPT
LQTFNSNSRPTQYAQPLQPPPLPQPPQQQLYHSQQLFIQPSSDLLRDYFD
YSQLLQSSADFHPQQQRQQQPSSLLQKMYYNSQLASLQSSFLQPASASTP
SSALPSSASSSASFPLFFSEQNQQMGFFRQPXNPNQGGPSDFQAPSWSHS
GTIHPHPVDTFMNTFCFLSLFY back to topmRNA from alignment at JF412350:29..1447+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JF412350.1-ERF3.m1 ID=JF412350.1-ERF3.m1; Name=ERF3; organism=Malus x domestica; type=mRNA; length=1419bp; location=Sequence derived from: JF412350:29..1447+ (Malus x domestica
atgtgcttactgaaggtggcgaaccagaggagctcaggaggcggcggtca
atacgacaggtttggctctcaaaacgatagtaccgatgttactgctgtag
atattgataatatcaactacggcggcgtaggattggagtcgccgccgccg
tatcatcaacagcacgtgtcgctgtcgacgccgacaatgtttttggggta
cagtcaggcggcaacggagatgtcggcgatggtgtcggctttgacgcatg
tcgtttccggacagagaggcagcgacagctggggacatgttggaagcggt
ggagttacgtctagtttcggccaactttattcttcttcatttccatctgc
ttctcctttgtcagctgctttttcttcaagtgcttctcctggtcctcaca
attgggtcggtcaaaagagagggcgcgaagaagatttggattctgcttct
gcttctgcttctgctcaaacccaattcatggaatctggtaatagagcttt
taggggtggctatagtgattacagaggaacacaatcagagtctccatctg
gtggtgcaagtgcaactgtgacagaagaaagtacaaatttttccaccgcc
accgtctcggccaccacagcggtaccaaccacaccatcaagtacagaatc
tgtttcatttgaagaaactggtgagaggaagagaagatacaggggagtta
gacagaggccctggggaaaatgggcagctgagatacgcgatccacacaaa
gctgcaagagtctggcttggcacattcgacacggcggaggcagccgcccg
agcctacgatgaagctgctctaagattcagaggaaacagagctaaactaa
acttcccagaaaacgtcagactcgttcaaccaccaccaccaccaccaact
ctccaaaccttcaattcaaattctagaccaacacaatatgctcagccgtt
gcagccaccgccgcttccacaaccaccacaacagcagctctatcactccc
agcagcttttcatccaaccctcctccgacctcctccgagattacttcgac
tactctcagctccttcaaagctccgctgacttccatccacagcagcaacg
acaacagcaaccctcaagtttgctgcaaaaaatgtactacaattcccagt
tggcgtcacttcaatcttcttttctacaacctgcatcggcatccactcca
tcttctgcattgccgtcctctgcctcctcctctgcttcatttcctctgtt
tttctctgagcagaatcagcaaatggggtttttccggcagccgcanaatc
cgaaccagggtggtccgtctgatttccaggcaccatcttggtctcattcc
ggcacaatccatcctcatccagttgatactttcatgaatactttttgttt
tctttctttattttattaa back to topCoding sequence (CDS) from alignment at JF412350:29..1447+ >JF412350.1-ERF3.m1 ID=JF412350.1-ERF3.m1; Name=ERF3; organism=Malus x domestica; type=CDS; length=1419bp; location=Sequence derived from: JF412350:29..1447+ (Malus x domestica
atgtgcttactgaaggtggcgaaccagaggagctcaggaggcggcggtca
atacgacaggtttggctctcaaaacgatagtaccgatgttactgctgtag
atattgataatatcaactacggcggcgtaggattggagtcgccgccgccg
tatcatcaacagcacgtgtcgctgtcgacgccgacaatgtttttggggta
cagtcaggcggcaacggagatgtcggcgatggtgtcggctttgacgcatg
tcgtttccggacagagaggcagcgacagctggggacatgttggaagcggt
ggagttacgtctagtttcggccaactttattcttcttcatttccatctgc
ttctcctttgtcagctgctttttcttcaagtgcttctcctggtcctcaca
attgggtcggtcaaaagagagggcgcgaagaagatttggattctgcttct
gcttctgcttctgctcaaacccaattcatggaatctggtaatagagcttt
taggggtggctatagtgattacagaggaacacaatcagagtctccatctg
gtggtgcaagtgcaactgtgacagaagaaagtacaaatttttccaccgcc
accgtctcggccaccacagcggtaccaaccacaccatcaagtacagaatc
tgtttcatttgaagaaactggtgagaggaagagaagatacaggggagtta
gacagaggccctggggaaaatgggcagctgagatacgcgatccacacaaa
gctgcaagagtctggcttggcacattcgacacggcggaggcagccgcccg
agcctacgatgaagctgctctaagattcagaggaaacagagctaaactaa
acttcccagaaaacgtcagactcgttcaaccaccaccaccaccaccaact
ctccaaaccttcaattcaaattctagaccaacacaatatgctcagccgtt
gcagccaccgccgcttccacaaccaccacaacagcagctctatcactccc
agcagcttttcatccaaccctcctccgacctcctccgagattacttcgac
tactctcagctccttcaaagctccgctgacttccatccacagcagcaacg
acaacagcaaccctcaagtttgctgcaaaaaatgtactacaattcccagt
tggcgtcacttcaatcttcttttctacaacctgcatcggcatccactcca
tcttctgcattgccgtcctctgcctcctcctctgcttcatttcctctgtt
tttctctgagcagaatcagcaaatggggtttttccggcagccgcanaatc
cgaaccagggtggtccgtctgatttccaggcaccatcttggtctcattcc
ggcacaatccatcctcatccagttgatactttcatgaatactttttgttt
tctttctttattttattaa back to top
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