ERF3, JF412350.1-ERF3.m1 (mRNA) Malus x domestica

Transcript Overview


Name	ERF3
Unique Name	JF412350.1-ERF3.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	ethylene response factor 3
Genbank Note	contains AP2/ERF domain conserved motif 10-1 based on Nakano et al (Plant Physiology, 2006)

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
JF412350	region	JF412350:29..1447 +	NCBI Rosaceae gene and mRNA sequences	n/a
Chr05	chromosome	Chr05:4961136..4963142 +	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a
chr5	chromosome	ERF3:1..1419 . chr5:20364544..20366549 +		n/a
chr5	chromosome	ERF3:1..1419 . chr5:23141903..23143908 -		n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JF412350.1-ERF3.m1-cds1	JF412350.1-ERF3.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ERF3	JF412350.1-ERF3.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	325534103
nuccore	JF412350.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JF412350:29..1447+
coding sequence from alignment at JF412350:29..1447+

mRNA sequence

>JF412350.1-ERF3.m1 ID=JF412350.1-ERF3.m1; Name=ERF3; organism=Malus x domestica; type=mRNA; length=1419bp
atgtgcttactgaaggtggcgaaccagaggagctcaggaggcggcggtca
atacgacaggtttggctctcaaaacgatagtaccgatgttactgctgtag
atattgataatatcaactacggcggcgtaggattggagtcgccgccgccg
tatcatcaacagcacgtgtcgctgtcgacgccgacaatgtttttggggta
cagtcaggcggcaacggagatgtcggcgatggtgtcggctttgacgcatg
tcgtttccggacagagaggcagcgacagctggggacatgttggaagcggt
ggagttacgtctagtttcggccaactttattcttcttcatttccatctgc
ttctcctttgtcagctgctttttcttcaagtgcttctcctggtcctcaca
attgggtcggtcaaaagagagggcgcgaagaagatttggattctgcttct
gcttctgcttctgctcaaacccaattcatggaatctggtaatagagcttt
taggggtggctatagtgattacagaggaacacaatcagagtctccatctg
gtggtgcaagtgcaactgtgacagaagaaagtacaaatttttccaccgcc
accgtctcggccaccacagcggtaccaaccacaccatcaagtacagaatc
tgtttcatttgaagaaactggtgagaggaagagaagatacaggggagtta
gacagaggccctggggaaaatgggcagctgagatacgcgatccacacaaa
gctgcaagagtctggcttggcacattcgacacggcggaggcagccgcccg
agcctacgatgaagctgctctaagattcagaggaaacagagctaaactaa
acttcccagaaaacgtcagactcgttcaaccaccaccaccaccaccaact
ctccaaaccttcaattcaaattctagaccaacacaatatgctcagccgtt
gcagccaccgccgcttccacaaccaccacaacagcagctctatcactccc
agcagcttttcatccaaccctcctccgacctcctccgagattacttcgac
tactctcagctccttcaaagctccgctgacttccatccacagcagcaacg
acaacagcaaccctcaagtttgctgcaaaaaatgtactacaattcccagt
tggcgtcacttcaatcttcttttctacaacctgcatcggcatccactcca
tcttctgcattgccgtcctctgcctcctcctctgcttcatttcctctgtt
tttctctgagcagaatcagcaaatggggtttttccggcagccgcanaatc
cgaaccagggtggtccgtctgatttccaggcaccatcttggtctcattcc
ggcacaatccatcctcatccagttgatactttcatgaatactttttgttt
tctttctttattttattaa

protein sequence of ERF3

>JF412350.1-ERF3.p1 ID=JF412350.1-ERF3.p1; Name=ERF3; organism=Malus x domestica; type=polypeptide; length=472bp
MCLLKVANQRSSGGGGQYDRFGSQNDSTDVTAVDIDNINYGGVGLESPPP
YHQQHVSLSTPTMFLGYSQAATEMSAMVSALTHVVSGQRGSDSWGHVGSG
GVTSSFGQLYSSSFPSASPLSAAFSSSASPGPHNWVGQKRGREEDLDSAS
ASASAQTQFMESGNRAFRGGYSDYRGTQSESPSGGASATVTEESTNFSTA
TVSATTAVPTTPSSTESVSFEETGERKRRYRGVRQRPWGKWAAEIRDPHK
AARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRLVQPPPPPPT
LQTFNSNSRPTQYAQPLQPPPLPQPPQQQLYHSQQLFIQPSSDLLRDYFD
YSQLLQSSADFHPQQQRQQQPSSLLQKMYYNSQLASLQSSFLQPASASTP
SSALPSSASSSASFPLFFSEQNQQMGFFRQPXNPNQGGPSDFQAPSWSHS
GTIHPHPVDTFMNTFCFLSLFY

mRNA from alignment at JF412350:29..1447+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JF412350.1-ERF3.m1 ID=JF412350.1-ERF3.m1; Name=ERF3; organism=Malus x domestica; type=mRNA; length=1419bp; location=Sequence derived from: JF412350:29..1447+ (Malus x domestica
atgtgcttactgaaggtggcgaaccagaggagctcaggaggcggcggtca
atacgacaggtttggctctcaaaacgatagtaccgatgttactgctgtag
atattgataatatcaactacggcggcgtaggattggagtcgccgccgccg
tatcatcaacagcacgtgtcgctgtcgacgccgacaatgtttttggggta
cagtcaggcggcaacggagatgtcggcgatggtgtcggctttgacgcatg
tcgtttccggacagagaggcagcgacagctggggacatgttggaagcggt
ggagttacgtctagtttcggccaactttattcttcttcatttccatctgc
ttctcctttgtcagctgctttttcttcaagtgcttctcctggtcctcaca
attgggtcggtcaaaagagagggcgcgaagaagatttggattctgcttct
gcttctgcttctgctcaaacccaattcatggaatctggtaatagagcttt
taggggtggctatagtgattacagaggaacacaatcagagtctccatctg
gtggtgcaagtgcaactgtgacagaagaaagtacaaatttttccaccgcc
accgtctcggccaccacagcggtaccaaccacaccatcaagtacagaatc
tgtttcatttgaagaaactggtgagaggaagagaagatacaggggagtta
gacagaggccctggggaaaatgggcagctgagatacgcgatccacacaaa
gctgcaagagtctggcttggcacattcgacacggcggaggcagccgcccg
agcctacgatgaagctgctctaagattcagaggaaacagagctaaactaa
acttcccagaaaacgtcagactcgttcaaccaccaccaccaccaccaact
ctccaaaccttcaattcaaattctagaccaacacaatatgctcagccgtt
gcagccaccgccgcttccacaaccaccacaacagcagctctatcactccc
agcagcttttcatccaaccctcctccgacctcctccgagattacttcgac
tactctcagctccttcaaagctccgctgacttccatccacagcagcaacg
acaacagcaaccctcaagtttgctgcaaaaaatgtactacaattcccagt
tggcgtcacttcaatcttcttttctacaacctgcatcggcatccactcca
tcttctgcattgccgtcctctgcctcctcctctgcttcatttcctctgtt
tttctctgagcagaatcagcaaatggggtttttccggcagccgcanaatc
cgaaccagggtggtccgtctgatttccaggcaccatcttggtctcattcc
ggcacaatccatcctcatccagttgatactttcatgaatactttttgttt
tctttctttattttattaa

Coding sequence (CDS) from alignment at JF412350:29..1447+

>JF412350.1-ERF3.m1 ID=JF412350.1-ERF3.m1; Name=ERF3; organism=Malus x domestica; type=CDS; length=1419bp; location=Sequence derived from: JF412350:29..1447+ (Malus x domestica
atgtgcttactgaaggtggcgaaccagaggagctcaggaggcggcggtca
atacgacaggtttggctctcaaaacgatagtaccgatgttactgctgtag
atattgataatatcaactacggcggcgtaggattggagtcgccgccgccg
tatcatcaacagcacgtgtcgctgtcgacgccgacaatgtttttggggta
cagtcaggcggcaacggagatgtcggcgatggtgtcggctttgacgcatg
tcgtttccggacagagaggcagcgacagctggggacatgttggaagcggt
ggagttacgtctagtttcggccaactttattcttcttcatttccatctgc
ttctcctttgtcagctgctttttcttcaagtgcttctcctggtcctcaca
attgggtcggtcaaaagagagggcgcgaagaagatttggattctgcttct
gcttctgcttctgctcaaacccaattcatggaatctggtaatagagcttt
taggggtggctatagtgattacagaggaacacaatcagagtctccatctg
gtggtgcaagtgcaactgtgacagaagaaagtacaaatttttccaccgcc
accgtctcggccaccacagcggtaccaaccacaccatcaagtacagaatc
tgtttcatttgaagaaactggtgagaggaagagaagatacaggggagtta
gacagaggccctggggaaaatgggcagctgagatacgcgatccacacaaa
gctgcaagagtctggcttggcacattcgacacggcggaggcagccgcccg
agcctacgatgaagctgctctaagattcagaggaaacagagctaaactaa
acttcccagaaaacgtcagactcgttcaaccaccaccaccaccaccaact
ctccaaaccttcaattcaaattctagaccaacacaatatgctcagccgtt
gcagccaccgccgcttccacaaccaccacaacagcagctctatcactccc
agcagcttttcatccaaccctcctccgacctcctccgagattacttcgac
tactctcagctccttcaaagctccgctgacttccatccacagcagcaacg
acaacagcaaccctcaagtttgctgcaaaaaatgtactacaattcccagt
tggcgtcacttcaatcttcttttctacaacctgcatcggcatccactcca
tcttctgcattgccgtcctctgcctcctcctctgcttcatttcctctgtt
tttctctgagcagaatcagcaaatggggtttttccggcagccgcanaatc
cgaaccagggtggtccgtctgatttccaggcaccatcttggtctcattcc
ggcacaatccatcctcatccagttgatactttcatgaatactttttgttt
tctttctttattttattaa