PEL1, HQ232414.1-PEL1.m1 (mRNA) Rosa x borboniana

Transcript Overview
NamePEL1
Unique NameHQ232414.1-PEL1.m1
TypemRNA
OrganismRosa x borboniana ()
Sourcegenbank
Productpectate lyase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ232414.1-PEL1.m1-cds1HQ232414.1-PEL1.m1-cds1Rosa x borbonianaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PEL1HQ232414.1-PEL1.p1Rosa x borbonianapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI310753532
nuccoreHQ232414.1
Alignments
Feature NameTypeLocationAnalysis
HQ232414 region HQ232414:1..1347+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ232414.1-PEL1.m1 ID=HQ232414.1-PEL1.m1; Name=PEL1; organism=Rosa x borboniana; type=mRNA; length=1347bp
atgaggttagctagctcgagagccacaatgcggttctatatgactccact
gctgcttcttttggccttgctcgtaagcgtagcggcttcaatagagaatg
acaagcctttacagtcaaggtccgtgggactagaggagccaaaaagctcc
atcaactcgtcaatgtcgacagaaaggtccaacgatgactggaatgagca
cgcagtagataatccggaggagatcgcgtccttggttgatacgaccattc
gtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg
aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccg
caagaggctagccaattgcggcattgggttcgggcgcaatgccgtaggcg
gccgtgacggaaggtattacgttgtaaatgaccccggtcatgatgatccg
gtgaaccccaggcccggtaccctccgtcacgctgtcatccaggacaggcc
tttgtggattgtgttcaagcgtgatatggtgatcacattgaagcaggagc
ttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac
attgcttatggaggttgcattactattcaatacgttactaatgtgatcat
ccatggcctacatatccatgactgcaagcctaccggcaatgccatggtcc
ggagctcaccgagtcattatgggtggaggaccatggctgatagggatggt
atatccattttcggagccagccacatttgggtcgaccacaactcgctctc
gaattgcgccgatggcctcattgatgctatcatgggttctactgccatta
ccatttctaacaactacttcactcaccataatgaggttatgttgttgggg
cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgccta
caatcattttggtgagggactcatccaaagaatgccaagatgtagacatg
ggtatttccatgtggtgaacaatgactacactcactgggaaatgtatgcc
attggtggaagtgctgatcccaccattaacagccagggcaacagatatct
cgcccctaccaaccgttttgccaaagaggtgacgcatagagttgagacca
caggcagatggaggcactggaactggagatcagaaggagacctactcctt
aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgc
cagagcttcaagcttaggggcgaagtcatcttccatgattggcagcatta
ctgctggtgctggtgttcttaattgccggtctggtcgtcaatgttaa
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protein sequence of PEL1

>HQ232414.1-PEL1.p1 ID=HQ232414.1-PEL1.p1; Name=PEL1; organism=Rosa x borboniana; type=polypeptide; length=448bp
MRLASSRATMRFYMTPLLLLLALLVSVAASIENDKPLQSRSVGLEEPKSS
INSSMSTERSNDDWNEHAVDNPEEIASLVDTTIRNSTARRNLGFFSCATG
NPIDDCWRCDPQWQRHRKRLANCGIGFGRNAVGGRDGRYYVVNDPGHDDP
VNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDARGVNVH
IAYGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADRDG
ISIFGASHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLG
HSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA
IGGSADPTINSQGNRYLAPTNRFAKEVTHRVETTGRWRHWNWRSEGDLLL
NGAFFVQSGAGAAASYARASSLGAKSSSMIGSITAGAGVLNCRSGRQC
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mRNA from alignment at HQ232414:1..1347+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ232414.1-PEL1.m1 ID=HQ232414.1-PEL1.m1; Name=PEL1; organism=Rosa x borboniana; type=mRNA; length=1347bp; location=Sequence derived from: HQ232414:1..1347+ (Rosa x borboniana
atgaggttagctagctcgagagccacaatgcggttctatatgactccact
gctgcttcttttggccttgctcgtaagcgtagcggcttcaatagagaatg
acaagcctttacagtcaaggtccgtgggactagaggagccaaaaagctcc
atcaactcgtcaatgtcgacagaaaggtccaacgatgactggaatgagca
cgcagtagataatccggaggagatcgcgtccttggttgatacgaccattc
gtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg
aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccg
caagaggctagccaattgcggcattgggttcgggcgcaatgccgtaggcg
gccgtgacggaaggtattacgttgtaaatgaccccggtcatgatgatccg
gtgaaccccaggcccggtaccctccgtcacgctgtcatccaggacaggcc
tttgtggattgtgttcaagcgtgatatggtgatcacattgaagcaggagc
ttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac
attgcttatggaggttgcattactattcaatacgttactaatgtgatcat
ccatggcctacatatccatgactgcaagcctaccggcaatgccatggtcc
ggagctcaccgagtcattatgggtggaggaccatggctgatagggatggt
atatccattttcggagccagccacatttgggtcgaccacaactcgctctc
gaattgcgccgatggcctcattgatgctatcatgggttctactgccatta
ccatttctaacaactacttcactcaccataatgaggttatgttgttgggg
cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgccta
caatcattttggtgagggactcatccaaagaatgccaagatgtagacatg
ggtatttccatgtggtgaacaatgactacactcactgggaaatgtatgcc
attggtggaagtgctgatcccaccattaacagccagggcaacagatatct
cgcccctaccaaccgttttgccaaagaggtgacgcatagagttgagacca
caggcagatggaggcactggaactggagatcagaaggagacctactcctt
aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgc
cagagcttcaagcttaggggcgaagtcatcttccatgattggcagcatta
ctgctggtgctggtgttcttaattgccggtctggtcgtcaatgttaa
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Coding sequence (CDS) from alignment at HQ232414:1..1347+

>HQ232414.1-PEL1.m1 ID=HQ232414.1-PEL1.m1; Name=PEL1; organism=Rosa x borboniana; type=CDS; length=1347bp; location=Sequence derived from: HQ232414:1..1347+ (Rosa x borboniana
atgaggttagctagctcgagagccacaatgcggttctatatgactccact
gctgcttcttttggccttgctcgtaagcgtagcggcttcaatagagaatg
acaagcctttacagtcaaggtccgtgggactagaggagccaaaaagctcc
atcaactcgtcaatgtcgacagaaaggtccaacgatgactggaatgagca
cgcagtagataatccggaggagatcgcgtccttggttgatacgaccattc
gtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg
aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccg
caagaggctagccaattgcggcattgggttcgggcgcaatgccgtaggcg
gccgtgacggaaggtattacgttgtaaatgaccccggtcatgatgatccg
gtgaaccccaggcccggtaccctccgtcacgctgtcatccaggacaggcc
tttgtggattgtgttcaagcgtgatatggtgatcacattgaagcaggagc
ttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac
attgcttatggaggttgcattactattcaatacgttactaatgtgatcat
ccatggcctacatatccatgactgcaagcctaccggcaatgccatggtcc
ggagctcaccgagtcattatgggtggaggaccatggctgatagggatggt
atatccattttcggagccagccacatttgggtcgaccacaactcgctctc
gaattgcgccgatggcctcattgatgctatcatgggttctactgccatta
ccatttctaacaactacttcactcaccataatgaggttatgttgttgggg
cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgccta
caatcattttggtgagggactcatccaaagaatgccaagatgtagacatg
ggtatttccatgtggtgaacaatgactacactcactgggaaatgtatgcc
attggtggaagtgctgatcccaccattaacagccagggcaacagatatct
cgcccctaccaaccgttttgccaaagaggtgacgcatagagttgagacca
caggcagatggaggcactggaactggagatcagaaggagacctactcctt
aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgc
cagagcttcaagcttaggggcgaagtcatcttccatgattggcagcatta
ctgctggtgctggtgttcttaattgccggtctggtcgtcaatgttaa
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