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Transcript Overview
Name | PEL1 |
Unique Name | HQ232414.1-PEL1.m1 |
Type | mRNA |
Organism | Rosa x borboniana () |
Source | genbank |
Product | pectate lyase |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
HQ232414.1-PEL1.m1-cds1 | HQ232414.1-PEL1.m1-cds1 | Rosa x borboniana | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
PEL1 | HQ232414.1-PEL1.p1 | Rosa x borboniana | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >HQ232414.1-PEL1.m1 ID=HQ232414.1-PEL1.m1; Name=PEL1; organism=Rosa x borboniana; type=mRNA; length=1347bp atgaggttagctagctcgagagccacaatgcggttctatatgactccact gctgcttcttttggccttgctcgtaagcgtagcggcttcaatagagaatg acaagcctttacagtcaaggtccgtgggactagaggagccaaaaagctcc atcaactcgtcaatgtcgacagaaaggtccaacgatgactggaatgagca cgcagtagataatccggaggagatcgcgtccttggttgatacgaccattc gtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccg caagaggctagccaattgcggcattgggttcgggcgcaatgccgtaggcg gccgtgacggaaggtattacgttgtaaatgaccccggtcatgatgatccg gtgaaccccaggcccggtaccctccgtcacgctgtcatccaggacaggcc tttgtggattgtgttcaagcgtgatatggtgatcacattgaagcaggagc ttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac attgcttatggaggttgcattactattcaatacgttactaatgtgatcat ccatggcctacatatccatgactgcaagcctaccggcaatgccatggtcc ggagctcaccgagtcattatgggtggaggaccatggctgatagggatggt atatccattttcggagccagccacatttgggtcgaccacaactcgctctc gaattgcgccgatggcctcattgatgctatcatgggttctactgccatta ccatttctaacaactacttcactcaccataatgaggttatgttgttgggg cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgccta caatcattttggtgagggactcatccaaagaatgccaagatgtagacatg ggtatttccatgtggtgaacaatgactacactcactgggaaatgtatgcc attggtggaagtgctgatcccaccattaacagccagggcaacagatatct cgcccctaccaaccgttttgccaaagaggtgacgcatagagttgagacca caggcagatggaggcactggaactggagatcagaaggagacctactcctt aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgc cagagcttcaagcttaggggcgaagtcatcttccatgattggcagcatta ctgctggtgctggtgttcttaattgccggtctggtcgtcaatgttaa back to topprotein sequence of PEL1 >HQ232414.1-PEL1.p1 ID=HQ232414.1-PEL1.p1; Name=PEL1; organism=Rosa x borboniana; type=polypeptide; length=448bp MRLASSRATMRFYMTPLLLLLALLVSVAASIENDKPLQSRSVGLEEPKSS INSSMSTERSNDDWNEHAVDNPEEIASLVDTTIRNSTARRNLGFFSCATG NPIDDCWRCDPQWQRHRKRLANCGIGFGRNAVGGRDGRYYVVNDPGHDDP VNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDARGVNVH IAYGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADRDG ISIFGASHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLG HSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYA IGGSADPTINSQGNRYLAPTNRFAKEVTHRVETTGRWRHWNWRSEGDLLL NGAFFVQSGAGAAASYARASSLGAKSSSMIGSITAGAGVLNCRSGRQC back to topmRNA from alignment at HQ232414:1..1347+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >HQ232414.1-PEL1.m1 ID=HQ232414.1-PEL1.m1; Name=PEL1; organism=Rosa x borboniana; type=mRNA; length=1347bp; location=Sequence derived from: HQ232414:1..1347+ (Rosa x borboniana atgaggttagctagctcgagagccacaatgcggttctatatgactccact
gctgcttcttttggccttgctcgtaagcgtagcggcttcaatagagaatg
acaagcctttacagtcaaggtccgtgggactagaggagccaaaaagctcc
atcaactcgtcaatgtcgacagaaaggtccaacgatgactggaatgagca
cgcagtagataatccggaggagatcgcgtccttggttgatacgaccattc
gtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg
aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccg
caagaggctagccaattgcggcattgggttcgggcgcaatgccgtaggcg
gccgtgacggaaggtattacgttgtaaatgaccccggtcatgatgatccg
gtgaaccccaggcccggtaccctccgtcacgctgtcatccaggacaggcc
tttgtggattgtgttcaagcgtgatatggtgatcacattgaagcaggagc
ttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac
attgcttatggaggttgcattactattcaatacgttactaatgtgatcat
ccatggcctacatatccatgactgcaagcctaccggcaatgccatggtcc
ggagctcaccgagtcattatgggtggaggaccatggctgatagggatggt
atatccattttcggagccagccacatttgggtcgaccacaactcgctctc
gaattgcgccgatggcctcattgatgctatcatgggttctactgccatta
ccatttctaacaactacttcactcaccataatgaggttatgttgttgggg
cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgccta
caatcattttggtgagggactcatccaaagaatgccaagatgtagacatg
ggtatttccatgtggtgaacaatgactacactcactgggaaatgtatgcc
attggtggaagtgctgatcccaccattaacagccagggcaacagatatct
cgcccctaccaaccgttttgccaaagaggtgacgcatagagttgagacca
caggcagatggaggcactggaactggagatcagaaggagacctactcctt
aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgc
cagagcttcaagcttaggggcgaagtcatcttccatgattggcagcatta
ctgctggtgctggtgttcttaattgccggtctggtcgtcaatgttaa back to topCoding sequence (CDS) from alignment at HQ232414:1..1347+ >HQ232414.1-PEL1.m1 ID=HQ232414.1-PEL1.m1; Name=PEL1; organism=Rosa x borboniana; type=CDS; length=1347bp; location=Sequence derived from: HQ232414:1..1347+ (Rosa x borboniana atgaggttagctagctcgagagccacaatgcggttctatatgactccact gctgcttcttttggccttgctcgtaagcgtagcggcttcaatagagaatg acaagcctttacagtcaaggtccgtgggactagaggagccaaaaagctcc atcaactcgtcaatgtcgacagaaaggtccaacgatgactggaatgagca cgcagtagataatccggaggagatcgcgtccttggttgatacgaccattc gtaacagtactgcgagaagaaacttgggatttttctcatgcgcaacaggg aatcccattgatgactgctggagatgtgacccacaatggcagcgccaccg caagaggctagccaattgcggcattgggttcgggcgcaatgccgtaggcg gccgtgacggaaggtattacgttgtaaatgaccccggtcatgatgatccg gtgaaccccaggcccggtaccctccgtcacgctgtcatccaggacaggcc tttgtggattgtgttcaagcgtgatatggtgatcacattgaagcaggagc ttataatgaacagcttcaagaccattgacgctcgtggagtcaatgtccac attgcttatggaggttgcattactattcaatacgttactaatgtgatcat ccatggcctacatatccatgactgcaagcctaccggcaatgccatggtcc ggagctcaccgagtcattatgggtggaggaccatggctgatagggatggt atatccattttcggagccagccacatttgggtcgaccacaactcgctctc gaattgcgccgatggcctcattgatgctatcatgggttctactgccatta ccatttctaacaactacttcactcaccataatgaggttatgttgttgggg cacagtgattcctacacaagggacaagcaaatgcaagtgaccattgccta caatcattttggtgagggactcatccaaagaatgccaagatgtagacatg ggtatttccatgtggtgaacaatgactacactcactgggaaatgtatgcc attggtggaagtgctgatcccaccattaacagccagggcaacagatatct cgcccctaccaaccgttttgccaaagaggtgacgcatagagttgagacca caggcagatggaggcactggaactggagatcagaaggagacctactcctt aatggagcgtttttcgtccaatccggagctggtgctgcagccagttatgc cagagcttcaagcttaggggcgaagtcatcttccatgattggcagcatta ctgctggtgctggtgttcttaattgccggtctggtcgtcaatgttaa back to top
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