|
Marker Overview
Name | s2_19199325 |
dbSNP ID | N/A |
SNP Array ID | Cherry 6+9K SNP array: | s2_19199325 |
|
Type | SNP |
SNP Alleles | A/G |
5' Flanking Sequence | ATTTAGAATCATTGAAACAAATTTTTGAATACTTCCCTTTCCTATTTTACATTATGTAAA
TGGTCTTCTGAATAACATAAAACTGCTGTTGCCATGGCAATATATATATACGTTTAAAGA
TGTTTGAAAGGCTTATAGCATTTCGGTCTT |
3' Flanking Sequence | CATGCCTGGGCAAATATAATGACATGTTGGATCCAAGCATGAATTTAGCAATAAAGCTGC
TTTTGAATAATGCTTATATCTAATGGTTTCTTTAATGCGTTGACTTGATTTTATTTGCAG
ATTTAGGAGCCTTAGCAAAAGGGTATAGGT |
Species | Prunus avium |
Publication | [view all] |
Contact | Patricio Hinrichsen Stijn Vanderzande
|
Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), genetically mapped |
Alignments
The following features are aligned
Publications
Year | Publication |
2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s2_19199325 ID=s2_19199325; Name=s2_19199325; organism=Prunus avium; type=genetic_marker; length=301bp ATTTAGAATCATTGAAACAAATTTTTGAATACTTCCCTTTCCTATTTTAC ATTATGTAAATGGTCTTCTGAATAACATAAAACTGCTGTTGCCATGGCAA TATATATATACGTTTAAAGATGTTTGAAAGGCTTATAGCATTTCGGTCTT RCATGCCTGGGCAAATATAATGACATGTTGGATCCAAGCATGAATTTAGC AATAAAGCTGCTTTTGAATAATGCTTATATCTAATGGTTTCTTTAATGCG TTGACTTGATTTTATTTGCAGATTTAGGAGCCTTAGCAAAAGGGTATAGG T
|