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Marker Overview
| Name | s7_11233991 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | CTGATTTCTCAGCACAAGTAAGATTTTGTGCCATAGTTATTTCCACATTCATGCTGCACA
TTTTACTCAAAATTTTGTATCAATGTTGTGCAGTTATCAACAGTGTCAAGACTTAAGCAT
GAGCATTTTGTGGAGTTGATGGGGTATTGC |
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| 3' Flanking Sequence | TGGACGCAAATAATCGAATTTTGATATATGAGTTTGCAGCAATGGGCTCTTTACATGACA
TATTACATGGTATTCTGAGTTATATATTTGGTTTTTGTGTTTGCTTGTACATTTGTCTCT
GTTGGAAACCGATTCATTGATTTGTTGTTC |
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| Species | Prunus avium |
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| Publication | [view all] |
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| Contact | Patricio Hinrichsen
Stijn Vanderzande
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| Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), genetically mapped |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
| 2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s7_11233991 ID=s7_11233991; Name=s7_11233991; organism=Prunus avium; type=genetic_marker; length=301bp
CTGATTTCTCAGCACAAGTAAGATTTTGTGCCATAGTTATTTCCACATTC
ATGCTGCACATTTTACTCAAAATTTTGTATCAATGTTGTGCAGTTATCAA
CAGTGTCAAGACTTAAGCATGAGCATTTTGTGGAGTTGATGGGGTATTGC
YTGGACGCAAATAATCGAATTTTGATATATGAGTTTGCAGCAATGGGCTC
TTTACATGACATATTACATGGTATTCTGAGTTATATATTTGGTTTTTGTG
TTTGCTTGTACATTTGTCTCTGTTGGAAACCGATTCATTGATTTGTTGTT
C
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