s7_8852295, s7_8852295 (genetic_marker) Prunus avium

Marker Overview
Names7_8852295
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:s7_8852295
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCAGCTTCAAGTACCTCAACCATTTTACCAAAATCTCTTCCAAATCCATCAGGCCTC
3' Flanking SequenceATAGTGA
SpeciesPrunus avium
Publication[view all]
ContactPatricio Hinrichsen
Stijn Vanderzande
Commentsweet cherry SNPs identified by GBS from Guajardo et al (2015), genetically mapped
Contact
NameDetails
Patricio Hinrichsen
First name:Patricio
Last name:Hinrichsen
Title:Investigator, R&D SubDirector
Institution:Instituto de Investigaciones Agropecuarias (INIA) La Platina
Address:Santa Rosa 11610, La Pintana
Country:Chile
Email:phinrichsen@inia.cl
Phone:56 2 25779101
Fax:56 2 25779104
Keywords:Plant genetics and breeding
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Pp07chromosomePp07:9240513..9240513 .Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-Ri-F1RiLG7N/A0.19s7_8852295View
2Sweet Cherry-RaxRi-F1LG7N/A0.16s7_8852295View
3Sweet_cherry_RaxRi_F1-physical-Prunus-persicaV1.0scaffold 7N/A8852295s7_8852295View
4Sweet Cherry-RosBREED-3.8K-20207N/A13.74s7_8852295View
Sequence
>s7_8852295 ID=s7_8852295; Name=s7_8852295; organism=Prunus avium; type=genetic_marker; length=64bp
CAGCTTCAAGTACCTCAACCATTTTACCAAAATCTCTTCCAAATCCATCA
GGCCTCRATAGTGA